Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151298g00007 ATGAAAACCCTTATTTTTCATACTGGTAAAGTGCCTTATGGGCACCAAACTGATTGGTTTATGCATGAGTATGGGCTTCAAGATAAGCATCTTATTCACAAAGGAATTGCTCAGGACTCTTATGTGATTTGTAAGGTGTTCCAGAAGAAACATTCTGGCCCTAAGACTAGGAGCCGTGCACAATATGAGAAATCATTTAATGAAAAAAATTGTGATGATGATGATGGTCACTTTGATGAAGCACCTGTTCCCGTTCAGACTATCTCATTTGATGGCTCTTCTCAGATTGAGCCAATTACTATTTCAAGCGAGTCTGAATCTCTAGATACTTCTCCTATCCCACCAACTCCTTCTTCAAATACAAGCATTCGCAGAGTTAAGAAGGATAATATTAATAATTCAAGGGTACTTAATTTCTCCAAAGAAGAAAAAACATTGCCTAAGGTATGGTTAGAAGACCTTGAATCTGAACGTACTCCAAATGAAATGGGGTTGGTTGACTTTGTCCCAGATGGAATAAACGATGATGACTTGGAGTACTTGGAATTACTTGATGTCGATTTCTTATAG 570 0.3772 MKTLIFHTGKVPYGHQTDWFMHEYGLQDKHLIHKGIAQDSYVICKVFQKKHSGPKTRSRAQYEKSFNEKNCDDDDGHFDEAPVPVQTISFDGSSQIEPITISSESESLDTSPIPPTPSSNTSIRRVKKDNINNSRVLNFSKEEKTLPKVWLEDLESERTPNEMGLVDFVPDGINDDDLEYLELLDVDFL 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151298g00007 189 SUPERFAMILY NAC domain 2 49 IPR036093 GO:0003677|GO:0006355
Stsc151298g00007 189 Gene3D NAC domain 1 53 IPR036093 GO:0003677|GO:0006355
Stsc151298g00007 189 ProSiteProfiles NAC domain profile. 1 49 IPR003441 GO:0003677|GO:0006355
Stsc151298g00007 189 MobiDBLite consensus disorder prediction 102 127 - -
Stsc151298g00007 189 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 2 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151298g00007 Stsc-Chr151298 59292 60179 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151298g00007 1 75 NAC Transcription Factor Family AT5G09330 46.667 1.82e-17 77.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151298g00007 - - adu:107480257 171.014