Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151295g00003 ATGAACATGTTGAATGTGAAACTCAGGCACTTGCTTGGGGAGGATCTTGGACCACTGAGCATAAAGGAGCTGCAGAATCTTGAGAAACAGCTTGAAGGTGCTTTAGCACAGGCCAGGCAGAGAAAGACACAAATTATGATTGAACAAATGGAAGAGCTGCGTAGGAGGGAGCGCCATCTTGGAGATATGAATAAGCAACTTAGGCTCAAGCTTGAGGCAGAAGGGTTCAATCTAAAAGCTATGGAAAACTTGTGGAGTTCCACTTCAGCTGCTACAAACAGCAACTTTACCTTTCAGCCTTCTCAAACCAACCCTATGGATTGCCAACCTGAGCCTTTCTTGCAAATAGGGTACCATCACTATGTTCAACCTGAAGCATCAAATAGTGTTGCTAAGAACATGGCTTGTGAGACCAATTTCATGCAAGGATGGGTCCTTTGA 441 0.4444 MNMLNVKLRHLLGEDLGPLSIKELQNLEKQLEGALAQARQRKTQIMIEQMEELRRRERHLGDMNKQLRLKLEAEGFNLKAMENLWSSTSAATNSNFTFQPSQTNPMDCQPEPFLQIGYHHYVQPEASNSVAKNMACETNFMQGWVL 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151295g00003 146 ProSiteProfiles K-box domain profile. 1 77 IPR002487 GO:0003700|GO:0005634|GO:0006355
Stsc151295g00003 146 Coils Coil 50 70 - -
Stsc151295g00003 146 Coils Coil 21 44 - -
Stsc151295g00003 146 Pfam K-box region 3 71 IPR002487 GO:0003700|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151295g00003 Stsc-Chr151295 35321 38270 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151295g00003 9 146 MADS-box Gene Family AT2G45650 55.172 2.39e-54 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151295g00003 K09264 - gmx:100810549 226.483