Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151290g00012 ATGGACTATAGAGTATACCATCACCTTTTGTTCAAGTGTGCTAGAATAGAACACAGTAGAGTAGAAGGGATGGAAATGGAGTTAATATACAAAGAAATCATGAAACCAGGTTCAGAAACTCCTCCACACCTGAAAACTTATCCCCTCTCCTTCCTGGACGTGACAGTTCCTCCCCAATACATGCCATTGGTTTACTTTTACGATCCAAAACAAATTGAAAACCAAGAATCCAAGATAGCCCTGCTAAAGAAATCCTTACCGGAAGCTCTCTCAGCGTACTACCCAATTGCAGGAAGGATCAAAGGTCGACTCGCCGTGGGCTGCAACGACGAAGGAGTCCCATTGCTCATCACAAAACTCAAATGCCATCTCTCACACTTTCTCAACAACCCAATCACACCTAAACTTCTTCCTCTCTTCCCGGACAATCTTGCATGGAGCGATATGAACAATCCAGAGCATGATCCCATCATGGCCATTCAAATCAACTGCTTCCAATGTGGCGGAATCGCAATAGCGATCTGCGTCTCTCACAAACTCGGCGACATTTCCACTCTCGTCAACTTCGTCAACCACTGGGCCGCCGTCACCACCCACCACCAAGATCAGAAAAAGCCACTCCCTTCTTCGCCATTACTCGACGCCGGAGTTTCTCTTTTTCCTCAAGGAAACCTTCCTATTTACCGCGAAAAGCCCTACTTCGCTCTCCCGAAATCGGTGTGCAAGAGGTTCGTGTTCGAAGCTTCCAAGATCGAAGCCCTCAAAGCCATGGCTGGACCAATTCATCATCCGACAAGGTTTCAAGCGGTGGCAGCACTGATTTGTAAGTGTGCGGTTTCTGCGCTAGGGTTAAACCCTAACTCCCCATTGTTAAGCTCCATTACCGTGAATCTCCGCAAGAGGATCGATCCTGCTGTTCCTAGCAACACCATAGGGAACATGGTTTCTTTCTTCATAATTTCTTCCTTTCAGAGAGATCAGCTACCGGAGTTGGTAAGCAAGATGAAAGAGGGGATGATTCGAAGTGAGATGCAGTTCAAGAAGTATGGAGGAAAGCACAAGGACTTGGATTTCATCGTAGAGGCACTGAAACGAGAGTCGGATGCTCCGCCGCCGGAGGCTATGAAGTTTCCGTTGATCGGACTTTCTAGTTGGTGCAGGTTTTCAATGTACGATGCGGATTTTGGGTGGGGGAAACCGATATGGATAGCGTCCATTACGAATTTTAAGAACGGTGTGGTTTTTATGGATGCGAGAGATGGAAAAGGGATGGAAGTTATTGTGAACATGGAAGAGCAGCACATGACAAGGTTTGAGTGTAACCAAGAACTTCTTCAATATGCCTCTCTTGACCCATCCGTTCAACTTTGA 1371 0.4668 MDYRVYHHLLFKCARIEHSRVEGMEMELIYKEIMKPGSETPPHLKTYPLSFLDVTVPPQYMPLVYFYDPKQIENQESKIALLKKSLPEALSAYYPIAGRIKGRLAVGCNDEGVPLLITKLKCHLSHFLNNPITPKLLPLFPDNLAWSDMNNPEHDPIMAIQINCFQCGGIAIAICVSHKLGDISTLVNFVNHWAAVTTHHQDQKKPLPSSPLLDAGVSLFPQGNLPIYREKPYFALPKSVCKRFVFEASKIEALKAMAGPIHHPTRFQAVAALICKCAVSALGLNPNSPLLSSITVNLRKRIDPAVPSNTIGNMVSFFIISSFQRDQLPELVSKMKEGMIRSEMQFKKYGGKHKDLDFIVEALKRESDAPPPEAMKFPLIGLSSWCRFSMYDADFGWGKPIWIASITNFKNGVVFMDARDGKGMEVIVNMEEQHMTRFECNQELLQYASLDPSVQL 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151290g00012 456 Gene3D - 237 448 IPR023213 -
Stsc151290g00012 456 PANTHER F21J9.9 27 449 - -
Stsc151290g00012 456 Pfam Transferase family 25 444 - -
Stsc151290g00012 456 Gene3D - 23 226 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151290g00012 Stsc-Chr151290 49689 51168 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151290g00012 24 439 Monolignol Biosynthesis Gene Families AT5G48930 24.161 2.90e-32 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151290g00012 - - adu:107481923 729.554