Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151287g00006 ATGTTTGACCCATCATCATCATCATCACACCAAGCTCCATTACTCTTCCCAGAAACTGCAGTACCAACCAATCTCACTGTTGCTGACTATGCTACCATGATCCAAAGAAGGGATTATTCTAATTATGGCGATGCTGGTGGTGTCTTTGGTGGTCAGAACTTGTTGACAAAGAAAGGAGGAGGTGGTGGTGGAGGAGGGAAGAAAGACAGGCACAGCAAGATTTACACATCTCAGGGTTTGAGGGACAGAAGGGTGAGGCTTTCTAGTGAGATTGCTAGAAAGTTCTTTGATCTTCAGGACATGCTTGAGTATGATAAAGCCAGCAACACCCTCCAATGGCTCTTCACCAAATCTGAGAATGCCATCAGAGACCTTGCAAGGACCAAGCAGGAGCACTCTTCCATTCCTGATCAAAACTACTGGCTCACCTTCTTCTCTCCCTCTCCCAAAAATGCAAAATCTTCTAATAATAAGGACTCATCAAGGGACAAGAGGCCTACTACTACTACTTCCAAGAAGGACAACACAAGATTCCCTCCTCCTCATCATCAACAAGAGCAGCTTCATGACCCTATTCTATTGAGAAACAATTTCATGAACCTTGAGATCCCTCATCATCAAGAAGCTAGTTTCAACAACCAGTCATCGTTATGCTCCCATCATTCCCCTCCAAAATGGAAGATATATTAA 690 0.4391 MFDPSSSSSHQAPLLFPETAVPTNLTVADYATMIQRRDYSNYGDAGGVFGGQNLLTKKGGGGGGGGKKDRHSKIYTSQGLRDRRVRLSSEIARKFFDLQDMLEYDKASNTLQWLFTKSENAIRDLARTKQEHSSIPDQNYWLTFFSPSPKNAKSSNNKDSSRDKRPTTTTSKKDNTRFPPPHHQQEQLHDPILLRNNFMNLEIPHHQEASFNNQSSLCSHHSPPKWKIY 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151287g00006 229 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 61 214 IPR005333 GO:0003700
Stsc151287g00006 229 Pfam TCP family transcription factor 66 173 IPR017887 -
Stsc151287g00006 229 MobiDBLite consensus disorder prediction 146 189 - -
Stsc151287g00006 229 MobiDBLite consensus disorder prediction 156 184 - -
Stsc151287g00006 229 ProSiteProfiles TCP domain profile. 67 125 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151287g00006 Stsc-Chr151287 24315 25736 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151287g00006 67 129 TCP Transcription Factor Family AT1G67260 68.254 7.42e-23 93.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Stsc151287g00006 TCP 8.5e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151287g00006 - - aip:107640299 211.846