Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151285g00003 ATGGCTTCTTATTACCACTACTATTACTACTTCCTCTTGTTTGTTCTTGTTGCTACTACTGCTGCAATTTCTGAAGCAGATGAAGAAACCAAGTTATCTAAAGATTTCTATTCCTACAGCTGCCCTAAACTGTTGCCTATAGTGAAGAATGAAGTCATAAAAGCCATTAACAAAGAAGCTCGCATGGGAGCTTCTTTACTTAGACTACATTTCCATGACTGCTTTGTAAACGGCTGTGATGCGTCAATACTATTGGACGATACAAAGAACTTCATCGGAGAGAAAACGGCAGCTGCTAACAATAACTCGGCAAGAGGGTTCAACGTGATTGATGACATTAAGGCTACAGTGGAGAAAGCATGCCCCAGGATTGTGTCATGTGCTGATATTCTTGCTCTGGCTGCTAGAGACTCTGTAGTTTATTTAGGAGGGCCTTCATGGGAAGTAGGCTTGGGAAGAAGGGATTCTACCACAGCTAGCAGAGCTGCTGCTAATAACTCTATTCCTGCACCCTTTTTTAGTCTAAGCTCTCTCAAGTCAAATTTTGCAAAGCATGGGCTTTCTGTGGAGGACTTGGTGGCTCTTTCAGGCGGACACACTATTGGCTTGGCTAGATGTGTACAATTCAGAGCACACATCTATAATGATTCCAACATTGATGCTTCCTTTGCCAAGTCCCTAAGGAGCAAGTGCCCTAGAAGAGGAAACGATGCTGTACTCGCACCCCTTGACCGTCAAACACCGACACATTTTGACAATCTATACTACAAAAATTTGCTGGTTAAAATGGGTCTTCTCCATTCAGACCAGGAGCTCTTAAATGGTGGTTCTACCAGTGCTCTGGTGAAGAAATTCGCTGCTAACAAGAATGAATTCTTTAAAGCTTTTGCCAAAGGCATGGTCAAAATGAGCAGCATCAATCCTCTCACAGGTAAAAAGGGACAGATCAGAATCCATTGCAGGAAAGTCAATTAG 975 0.4277 MASYYHYYYYFLLFVLVATTAAISEADEETKLSKDFYSYSCPKLLPIVKNEVIKAINKEARMGASLLRLHFHDCFVNGCDASILLDDTKNFIGEKTAAANNNSARGFNVIDDIKATVEKACPRIVSCADILALAARDSVVYLGGPSWEVGLGRRDSTTASRAAANNSIPAPFFSLSSLKSNFAKHGLSVEDLVALSGGHTIGLARCVQFRAHIYNDSNIDASFAKSLRSKCPRRGNDAVLAPLDRQTPTHFDNLYYKNLLVKMGLLHSDQELLNGGSTSALVKKFAANKNEFFKAFAKGMVKMSSINPLTGKKGQIRIHCRKVN 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151285g00003 324 PRINTS Plant peroxidase signature 65 85 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc151285g00003 324 PRINTS Plant peroxidase signature 258 275 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc151285g00003 324 PRINTS Plant peroxidase signature 143 158 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc151285g00003 324 PRINTS Plant peroxidase signature 190 202 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc151285g00003 324 PRINTS Plant peroxidase signature 242 257 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc151285g00003 324 PRINTS Plant peroxidase signature 105 118 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc151285g00003 324 PRINTS Plant peroxidase signature 41 60 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc151285g00003 324 PRINTS Plant peroxidase signature 298 311 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc151285g00003 324 PRINTS Plant peroxidase signature 124 134 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc151285g00003 324 Gene3D Peroxidase, domain 2 169 303 - -
Stsc151285g00003 324 FunFam Peroxidase 169 303 - -
Stsc151285g00003 324 PANTHER PEROXIDASE 72-RELATED 25 323 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc151285g00003 324 SUPERFAMILY Heme-dependent peroxidases 32 324 IPR010255 GO:0004601|GO:0006979|GO:0020037
Stsc151285g00003 324 FunFam Peroxidase 35 172 - -
Stsc151285g00003 324 ProSiteProfiles Plant heme peroxidase family profile. 31 324 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc151285g00003 324 Gene3D - 35 324 - -
Stsc151285g00003 324 PRINTS Haem peroxidase superfamily signature 191 206 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc151285g00003 324 PRINTS Haem peroxidase superfamily signature 125 142 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc151285g00003 324 PRINTS Haem peroxidase superfamily signature 63 77 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc151285g00003 324 PRINTS Haem peroxidase superfamily signature 244 259 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc151285g00003 324 PRINTS Haem peroxidase superfamily signature 143 155 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc151285g00003 324 CDD secretory_peroxidase 31 323 IPR033905 GO:0004601|GO:0042744
Stsc151285g00003 324 ProSitePatterns Peroxidases active site signature. 63 74 IPR019794 GO:0004601
Stsc151285g00003 324 ProSitePatterns Peroxidases proximal heme-ligand signature. 191 201 IPR019793 -
Stsc151285g00003 324 Pfam Peroxidase 48 288 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151285g00003 Stsc-Chr151285 38962 40458 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151285g00003 29 324 Peroxidase AT5G05340 60.403 1.33e-131 376
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151285g00003 K00430 - gmx:100793973 447.588