Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151285g00001 ATGGAGAAAAGGGGGAATGTTTTGATGCAGAAGTATGAATTCGGAAGGCTATTAGGCCAAGGAAACTTTGCAAAGGTTTACCATGCAAGGGACCTCAAAACTGGTGACAGCGTCGCCATTAAGGTGATCGACAAGGAGAAAATTCTCAAAGTTGGGATGATGGATCAAACCAAGAAAGAGATATCTATTATGAGACTGGTTAAGCACCCCAATGTGTTGCAGCTCTATGAGGTCTTAGCCACCAAAACCAAGATTTACTTCATCATAGAATATGCAAAAGGGGGTGAACTATTCAACAAGGTAGCTAGAGGTAAACTACATGAGGACTTGGCAAGGAAGTACTTTCAACAACTCATCAACGCCGTTGATTTTTGCCACAGAAGGGGTGTTTATCACAGGGATTTGAAGCCGGAAAACTTGCTTTTGGATGATAATGGTGTTCTCAAGGTAGCAGATTTCGGACTGAGTGCACTGGTTGAGGCTCATAGCCAAGGCAACATGCTGCAAACCGTTTGTGGAACACCTGCATATGTTGCTCCGGAGGTTATAAGTCGAAAGGGTTATGATGGAGCAAAAGCTGATGTTTGGTCTTGTGGAGTGATCTTATATGTTCTCTTGGCTGGTCATTTGCCATTCTATGATTTGAATCTTATGGCACTTTATAGGAAAATTACCAAAGCAGAGTACAAATCTCCGAACTGGTTTTCATTCGAAGCACGCAGGCTATTAGCAAGGATCCTTGATCCCAACCCAAAAACAAGGATTTCCACAGCAAAAGTTATGGAGAGTTCTTGGTTCAGAAAGGGACTCAATTCGAGATCAGATCAAAAGCAGGGAGAGGCTCTAGATTCAGCTTTAGCTGATTCTGATAAAGCTATTGGCCTCTATGACAGTGGAAGTTCTTCTGCAGAGGCAAATCAAGCATTGGTTAACTATAACTTAAATGCTTTCGATATAATTTCTCTTTCTGCCGGGCTTGACTTGTCTGGCCTTTTCGCAAGCAACGATGAACAGGATGGTGTAATGAAATTTACATCCCTGAACTCTGCCTCATTGATCATTTCCACGATGGAGAATATCGCTCGCATTCTGGGCTTGAAGATAGCTAAGAAGGATGGAGGCCTGTTGAGACTAGAGAGATCAAGGGAACGTAAGAAAGGGCAACTTTCCATTGATGTCGAAATATTCGAGTTTGCTCCCTCTTTCCATCTGGTTGAAATCAAGAGATCATGTGGTGATACAATAGAATACCAGAAGATATTGAAGGAAGATATAAAGCCAGCTTTGAAAGATATTGTCTCAGTTTGGCAAGGTGAGCAGCAACAACATCAATAA 1335 0.421 MEKRGNVLMQKYEFGRLLGQGNFAKVYHARDLKTGDSVAIKVIDKEKILKVGMMDQTKKEISIMRLVKHPNVLQLYEVLATKTKIYFIIEYAKGGELFNKVARGKLHEDLARKYFQQLINAVDFCHRRGVYHRDLKPENLLLDDNGVLKVADFGLSALVEAHSQGNMLQTVCGTPAYVAPEVISRKGYDGAKADVWSCGVILYVLLAGHLPFYDLNLMALYRKITKAEYKSPNWFSFEARRLLARILDPNPKTRISTAKVMESSWFRKGLNSRSDQKQGEALDSALADSDKAIGLYDSGSSSAEANQALVNYNLNAFDIISLSAGLDLSGLFASNDEQDGVMKFTSLNSASLIISTMENIARILGLKIAKKDGGLLRLERSRERKKGQLSIDVEIFEFAPSFHLVEIKRSCGDTIEYQKILKEDIKPALKDIVSVWQGEQQQHQ 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151285g00001 444 ProSitePatterns Serine/Threonine protein kinases active-site signature. 130 142 IPR008271 GO:0004672|GO:0006468
Stsc151285g00001 444 FunFam Non-specific serine/threonine protein kinase 3 91 - -
Stsc151285g00001 444 SMART serkin_6 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151285g00001 444 ProSitePatterns Protein kinases ATP-binding region signature. 18 41 IPR017441 GO:0005524
Stsc151285g00001 444 ProSiteProfiles NAF domain profile. 309 333 IPR018451 GO:0007165
Stsc151285g00001 444 Gene3D Transferase(Phosphotransferase) domain 1 3 315 - -
Stsc151285g00001 444 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 6 430 - -
Stsc151285g00001 444 Pfam Protein kinase domain 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151285g00001 444 SUPERFAMILY Protein kinase-like (PK-like) 8 279 IPR011009 -
Stsc151285g00001 444 Gene3D Kinase associated domain 1, KA1 316 436 - -
Stsc151285g00001 444 ProSiteProfiles Protein kinase domain profile. 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151285g00001 444 Pfam NAF domain 313 370 IPR004041 GO:0007165
Stsc151285g00001 444 FunFam Non-specific serine/threonine protein kinase 310 436 - -
Stsc151285g00001 444 CDD CIPK_C 315 430 - -
Stsc151285g00001 444 FunFam Non-specific serine/threonine protein kinase 6 307 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151285g00001 Stsc-Chr151285 6574 8825 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151285g00001 1 442 CBL-interacting serine-threonine protein kinases AT5G58380 58.462 0.0 562
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Stsc151285g00001 Pkinase 9.6e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151285g00001 K07198 - gmx:100816254 670.233