Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151284g00012 ATGGACCTCTTAGCCGCCGTCACCGCCGCCGCTGACGCCGACAATTTCCCGCTCCCAGACCACGTCGCTCCCTTCTCCGACTCCAGTGACCTACTCTACGCCGCCATTCCACCCTCCATCCGCCACAACCCTCAGAAGCTCCGCCCAATCCGATCCGTCGCTGCCGCTAGAGCCTCCTCTTCCCACCGTAACGGCCAGCTTCTAGAACCTCCCGAGACCGGCGGTTCCCCTCCGATTGAAGAAGATCTACCTGGTTCCGGGTCGGGCCACGGAGACGGGCGAACCGTTCCATTGTGTCAGGAATCCGGCTCATCTTTGGATGATGATGATGATACTGACATCGAAAATTCATCGGGGAGTGCCAAGCGCCCTGGCTTGACAAAGGGAAAGAGGAAGATGGAGAGAAGACTCGAAGATTTCGTGGAGAATATGGTAAAGAAGGTGATGGAAAAGCAAGAGCAGATGCACAAACAATTAGTGGACATGATTGAAAAGAAGGAGAAGGAGAGAGTGATGAGAGAAGAAGCTTGGAAGCGGCAAGAGATGGAGAGAATAAGGAAGGACGAAGAGGCCAGAACCCAAGAGAGGTCGCGAAACTCAGCCCTCATATCTGTCATCGAAAACCTGCTTGGCCACGAGATTCAAATCCCGCAACCGGCAGAGGTAAGCCGCAAAGGAGAAGAGGATGAACTCCGACACGGAAGTGAGGAAGCGAACGCTCAAAAGAGTCTCGGCGTCAGTGGTGAGGCGAATAACAACAGGTGGCCAGATGTTGAAGTTCAATCACTCATAACCTTGAGAACTTCAATGGAGCAGAAATTTCTTCTTATGGGATCCAAGGTATCAATATGGGAGGAGATATCCGAAGCAATGAATAAGATGGGATACAACCGTTCTGCGAAGAAGTGCAAGGAAAAATGGGAGAACATCAACAAGTACTATAAAAGGACGGTTGGGAGCGGCAAGAAACGGCGTCAAAATAGTAAAACCTGCCCTTACTTTAATGAGTTGGATGTTCTATATAGCAATGGTCTCCTCAATCTTGGAAACTCCTTGAGCAGTAGTACCAATGAAGTATCCAAGATTGCAAAGGAGGAAAGAGAAACTTGA 1110 0.5027 MDLLAAVTAAADADNFPLPDHVAPFSDSSDLLYAAIPPSIRHNPQKLRPIRSVAAARASSSHRNGQLLEPPETGGSPPIEEDLPGSGSGHGDGRTVPLCQESGSSLDDDDDTDIENSSGSAKRPGLTKGKRKMERRLEDFVENMVKKVMEKQEQMHKQLVDMIEKKEKERVMREEAWKRQEMERIRKDEEARTQERSRNSALISVIENLLGHEIQIPQPAEVSRKGEEDELRHGSEEANAQKSLGVSGEANNNRWPDVEVQSLITLRTSMEQKFLLMGSKVSIWEEISEAMNKMGYNRSAKKCKEKWENINKYYKRTVGSGKKRRQNSKTCPYFNELDVLYSNGLLNLGNSLSSSTNEVSKIAKEERET 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151284g00012 369 MobiDBLite consensus disorder prediction 222 237 - -
Stsc151284g00012 369 Coils Coil 149 169 - -
Stsc151284g00012 369 Gene3D - 255 316 - -
Stsc151284g00012 369 MobiDBLite consensus disorder prediction 42 133 - -
Stsc151284g00012 369 ProSiteProfiles Myb-like domain profile. 247 311 IPR001005 -
Stsc151284g00012 369 Pfam Myb/SANT-like DNA-binding domain 253 339 IPR044822 -
Stsc151284g00012 369 MobiDBLite consensus disorder prediction 219 252 - -
Stsc151284g00012 369 CDD GT1 253 317 - -
Stsc151284g00012 369 FunFam Trihelix transcription factor GT-2 255 316 - -
Stsc151284g00012 369 PANTHER FI21293P1 75 360 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151284g00012 Stsc-Chr151284 31612 33644 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151284g00012 129 341 Trihelix Transcription Factor Family AT5G47660 43.498 1.24e-51 175
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Stsc151284g00012 Myb_DNA-bind_4 3.2e-20 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151284g00012 - - adu:107482818 496.893