Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc151284g00008 | ATGGCTGAATCGGACAACGAATCAGGACAAGGAGGTAACGCAGCCGAGTTCAGGGAGCAGGATAGGTTCCTCCCCATAGCTAACGTGAGCAGGATCATGAAGAAGGCACTCCCGGCGAACGCGAAGATCTCGAAAGAGGCTAAGGAGACGGTGCAGGAATGCGTGTCGGAGTTCATAAGCTTCATAACTGGCGAGGCCTCCGATAAGTGCCAGAAGGAGAAGAGGAAGACCATCAACGGTGACGATTTGCTGTGGGCGATGACGACCCTTGGATTTGAGGAATACGTGGAGCCTCTTAAGATATATCTACACAAGTATAGGGAGATGGAAGGTGAGAGGACTGCTTTGATAGGAGGGGGGACCAGCAGTAGGCACCATGGTGGTGGTGGTGGTGACCACAGGAATGATGGCAGCGGCGACGGTGTTGGTGGTGGTGGTGGGATGGTGCCATCACCTATGATGATGATGATGGGGCATCAGCATCAAGGACACATGTTTGGATCTGGTGGAGGGAGTGGATCAGCATCTTCTGGAAGGATGACTAGGTAG | 549 | 0.5319 | MAESDNESGQGGNAAEFREQDRFLPIANVSRIMKKALPANAKISKEAKETVQECVSEFISFITGEASDKCQKEKRKTINGDDLLWAMTTLGFEEYVEPLKIYLHKYREMEGERTALIGGGTSSRHHGGGGGDHRNDGSGDGVGGGGGMVPSPMMMMMGHQHQGHMFGSGGGSGSASSGRMTR | 182 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc151284g00008 | 182 | PANTHER | CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED | 8 | 135 | IPR027113 | GO:0001228|GO:0006355|GO:0016602 | |
Stsc151284g00008 | 182 | Gene3D | Histone, subunit A | 12 | 131 | IPR009072 | GO:0046982 | |
Stsc151284g00008 | 182 | ProSitePatterns | NF-YB/HAP3 subunit signature. | 54 | 70 | IPR003956 | GO:0005634|GO:0006355|GO:0043565 | |
Stsc151284g00008 | 182 | PRINTS | CCAAT-binding transcription factor subunit A signature | 89 | 107 | - | - | |
Stsc151284g00008 | 182 | PRINTS | CCAAT-binding transcription factor subunit A signature | 70 | 88 | - | - | |
Stsc151284g00008 | 182 | PRINTS | CCAAT-binding transcription factor subunit A signature | 51 | 69 | - | - | |
Stsc151284g00008 | 182 | Pfam | Histone-like transcription factor (CBF/NF-Y) and archaeal histone | 23 | 87 | IPR003958 | - | |
Stsc151284g00008 | 182 | SUPERFAMILY | Histone-fold | 20 | 121 | IPR009072 | GO:0046982 | |
Stsc151284g00008 | 182 | MobiDBLite | consensus disorder prediction | 119 | 182 | - | - | |
Stsc151284g00008 | 182 | MobiDBLite | consensus disorder prediction | 167 | 182 | - | - | |
Stsc151284g00008 | 182 | FunFam | Nuclear transcription factor Y subunit B-3 | 12 | 136 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc151284g00008 | Stsc-Chr151284 | 19240 | 20484 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc151284g00008 | 1 | 165 | CCAAT-HAP3 Transcription Factor Family | AT4G14540 | 69.643 | 4.43e-71 | 210 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | NF-YB | Stsc151284g00008 | CBFD_NFYB_HMF | 1.4e-27 | CL0012 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc151284g00008 | K08065 | - | bvg:104903009 | 209.534 |