Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151283g00002 ATGGTTGGATTCCAGAACAGTGAGCACATGCCTGGGAGCAAGTGTAACGGTAATTCTAATAATATTCCAGGTCGAGTTGAACGACTTGTGAGAGGAAGAGAGCTGAGAAGAAGTAGTAGGGCATCTCTTTCCGTTGAGTCTCCTGATTATAGTAATAATAATCATAATAATGTTAATGGCGTTGCTGAATATTTTGAGCATGATCTGCGCTTGGGAGAAGAGAATAATTCCTATGTTGAACGTTCCCTGGAAGGGATAGTAGCAGCATCAAAGGCTCTTCGTGAAAGGGATGATGGGAAGCCTTTCAGGCAACGGCTTTTGGTTGTTGCTAATAGGCTTCCAGTCTCAGCTGTTAGGAGAGGTGAGGATTCATGGTCTCTGGAGATAAGTGCCGGTGGCTTGGTTAGTGCTCTCTTAGGTGTGAAGGAATTTGAGGCAAGGTGGATAGGATGGGCTGGAGTCAATGTGCCTGATGAGATTGGACAGAAGGCACTGACTAAAGCGTTGGCTGAAAAAAGATGTATCCCGGTTTTTCTTGATGAAGAGATTGTTCATCAATATTACAATGGCTATTGCAACAACATCTTGTGGCCCCTTTTCCATTACCTTGGACTTCCACAAGAAGACCGTCTTGCCACCACACGAAGTTTCCAGTCCCAGTTTACTGCTTATCAAAAAGCAAATCAAATGTTTGCTGATGTAGTAAATGAGCACTATGAAGAGGGCGATGTTGTTTGGTGCCATGACTACCATCTTATGTATCTTCCACAATGCTTGAAGAGATATAATAACAAAATGAAAGTTGGCTGGTTTCTACACACCCCATTTCCTTCTTCTGAAATCCACAGGACTCTGCCATCTCGATCGGAGCTCCTGCATGCAGTTCTTGCAGCTGACCTAGTTGGCTTTCACACCTATGATTATGCACGGCATTTCGTTAGTGCATGTACACGCATCCTTGGACTTGAGGGCACCCCAGAAGGAGTTGAGTATCAAGGGAAGCTGACTCGAGTTGCTGCATTCCCAATTGGAATAGACTCGGACCGATTTATACGAGCACTTGAACTTCCTCAAGTTCAGGAGCACATCAAAGAGTTAGAAGAAAGATTTAAAGGCAGAAAAGTAATGTTAGGAGTTGATCGCCTTGATATGATCAAAGGAATCCCTCAGAAAATTCTGGCATTTGAAAAATTTTTAGAAGAGAGTCCTTATTGGCGTGATAAAGTTGTTCTGCTTCAAATTGCTGTTCCAACAAGAACAGATGTTCCTGAGTATCAAAAGCTTACAAGCCAGGTTCATGAAATTGTTGGTCGCATCAATGGAAGATTTGGATCATTGACTGCTGTTCCTATACATCACCTGGATCGCTCTCTTGACTTCCATGCATTATGTGCATTGTATGCTGTTACAGATGTTGCACTTGTCACATCATTGAGGGATGGAATGAATCTTGTCAGTTATGAATTTGTGGCTTGCCAAGCTAAAAAGAAAGGGGTTCTCATTCTTAGCGAATTTGCGGGTGCTGCGCAGTCTCTTGGTGCTGGGGCAATTCTGGTCAACCCCTGGAACATCACAGAAGTTGCTGCTGCAATTGACAAGGCTTTAAATATGGACTCAGTGGAAAGAAAAAACAGACATGAACATAACTATGAGCATGTAACACAACACACTGCTCAGGAATGGGCAGAAACTTTTGTCAGTGAACTAAATGATACTGTTGTTGAGGCACAGCTAAGGACAAAACAAAAACCACCCCCACTCCCAACCAAGACTGCTATCGAACGTTATCTGCAGTCAAGTAACAGATTGCTCATTTTGGGGTTCAATGGAACTTTAACTGAACCTGTCGAGAAAAGAGGTGACCAGTATAAAGAAATTGAGCTCACTGTGCATCCAGAACTGAAACAACCCTTGAAAGAACTTTGTAGAGACCCAAAGACCACAATTGTTGTGCTAAGTGGAAGTGGTAGAGCAGTTCTAGATGAGAACTTCAAAGAGTATGACATGTGGCTGGCAGCAGAGAATGGGATGTTTTTAAACCCCTCAAAAGGAGAATGGATGACAACAATGCCAGAGCAGCTGAATATGGAATGGGTTGACAGTGTGAAGCATGTTTTTGAGTACTTCAGGGATAGAACACCTCGGTCGCGTTTCGAAGAAAGGGAAGCTTCACTTGTATGGAATTACAAACATGCAGATGTTGAGTTTGGAAGAGTTCAAGCAAGGGACATGCTGCAGCATCTTTGGACAGGCCCAATTTCTAATGCGTCAGTTGAAGTTGTTCAAGGTAGCCGATCCGTTGAGGTGCGAGCTGCTGGAGTTACTAAGGGAGCAGCTATTGACCGCATCCTGGGTGAGATAGTCCAAAGCAAATCCATGACAACACCGATTGATTATGTTCTTTGTATAGGACATTTTCTAGCGAAGGATGAAGACATTTATGCATTTTTTGAGCCTGAGCTTCCTTCTCCCGGTGTAGCTCTTCCAAGAAGCAAGGTAACAGATGGAATCAAATTTCCAGTTGAAAGGATGTCATCTTTGAAGATCCCTACTAACAAAAATGGAACAAAGTCATCTCAAAATAAGGCACAACGGCCGTCTCCAAATTCTGAGAAGAAACCAAACAATCATGTCTGCCGTGCACCGCGCCGCCCAGCTCCTGAAAAAGTCTCTTGGAACATCCTTGACTTGAACAAGGAGAATTACTTTTCTTGCGCCGTCGGACGGACGCAGACGAATGCTCGTTATACGCTTGGATCTTCGGATGATGTCGCCGCATTTCTGAAGGAGCTAGCGGGAGCTTCTTCTAACTCTACCTGA 2820 0.4376 MVGFQNSEHMPGSKCNGNSNNIPGRVERLVRGRELRRSSRASLSVESPDYSNNNHNNVNGVAEYFEHDLRLGEENNSYVERSLEGIVAASKALRERDDGKPFRQRLLVVANRLPVSAVRRGEDSWSLEISAGGLVSALLGVKEFEARWIGWAGVNVPDEIGQKALTKALAEKRCIPVFLDEEIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFTAYQKANQMFADVVNEHYEEGDVVWCHDYHLMYLPQCLKRYNNKMKVGWFLHTPFPSSEIHRTLPSRSELLHAVLAADLVGFHTYDYARHFVSACTRILGLEGTPEGVEYQGKLTRVAAFPIGIDSDRFIRALELPQVQEHIKELEERFKGRKVMLGVDRLDMIKGIPQKILAFEKFLEESPYWRDKVVLLQIAVPTRTDVPEYQKLTSQVHEIVGRINGRFGSLTAVPIHHLDRSLDFHALCALYAVTDVALVTSLRDGMNLVSYEFVACQAKKKGVLILSEFAGAAQSLGAGAILVNPWNITEVAAAIDKALNMDSVERKNRHEHNYEHVTQHTAQEWAETFVSELNDTVVEAQLRTKQKPPPLPTKTAIERYLQSSNRLLILGFNGTLTEPVEKRGDQYKEIELTVHPELKQPLKELCRDPKTTIVVLSGSGRAVLDENFKEYDMWLAAENGMFLNPSKGEWMTTMPEQLNMEWVDSVKHVFEYFRDRTPRSRFEEREASLVWNYKHADVEFGRVQARDMLQHLWTGPISNASVEVVQGSRSVEVRAAGVTKGAAIDRILGEIVQSKSMTTPIDYVLCIGHFLAKDEDIYAFFEPELPSPGVALPRSKVTDGIKFPVERMSSLKIPTNKNGTKSSQNKAQRPSPNSEKKPNNHVCRAPRRPAPEKVSWNILDLNKENYFSCAVGRTQTNARYTLGSSDDVAAFLKELAGASSNST 939
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151283g00002 939 MobiDBLite consensus disorder prediction 844 884 - -
Stsc151283g00002 939 MobiDBLite consensus disorder prediction 847 874 - -
Stsc151283g00002 939 SUPERFAMILY HAD-like 602 932 IPR036412 -
Stsc151283g00002 939 MobiDBLite consensus disorder prediction 41 57 - -
Stsc151283g00002 939 Gene3D Glycogen Phosphorylase B; 97 351 - -
Stsc151283g00002 939 Pfam Glycosyltransferase family 20 105 570 IPR001830 GO:0003824|GO:0005992
Stsc151283g00002 939 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1-like 352 554 - -
Stsc151283g00002 939 Pfam Trehalose-phosphatase 608 832 IPR003337 GO:0003824|GO:0005992
Stsc151283g00002 939 Gene3D Glycogen Phosphorylase B; 352 554 - -
Stsc151283g00002 939 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1 97 351 - -
Stsc151283g00002 939 CDD HAD_TPP 603 820 - -
Stsc151283g00002 939 Gene3D - 605 786 IPR023214 -
Stsc151283g00002 939 CDD GT20_TPS 105 570 IPR001830 GO:0003824|GO:0005992
Stsc151283g00002 939 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 104 573 - -
Stsc151283g00002 939 NCBIfam trehalose-phosphatase 601 815 IPR003337 GO:0003824|GO:0005992
Stsc151283g00002 939 MobiDBLite consensus disorder prediction 1 23 - -
Stsc151283g00002 939 MobiDBLite consensus disorder prediction 1 57 - -
Stsc151283g00002 939 Gene3D - 692 772 - -
Stsc151283g00002 939 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 97 932 IPR001830 GO:0003824|GO:0005992
Stsc151283g00002 939 FunFam Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1 692 772 - -
Stsc151283g00002 939 NCBIfam alpha,alpha-trehalose-phosphate synthase (UDP-forming) 105 570 IPR012766 GO:0003825|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151283g00002 Stsc-Chr151283 13172 30358 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151283g00002 10 937 Trehalose Biosynthesis Gene Families AT1G78580 75.869 0.0 1454
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151283g00002 K16055 - gmx:100789554 1569.67