Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151281g00009 ATGAAGACAGTGTACAAAGCAATTGATGAAGTTCTTGGGATAGAGGTAGCATGGAATCAGGTGAAGATCAACGAGGCGCTTCGCACGCCGGACAATTTGCAGCGGCTATACTCGGAGGTTCATCTTTTAGGCACCCTCAAGCATCAATCCATCATAAGATTCTATACTTCTTGGATTGATGTAGAGAACAAGGCCTTCAACTTTGTCACTGAAATGTTCACTTCAGGATCACTAAGAGAATACCGGAAAAAATATAAGAGAGTCAAGATACGGGCGATAAAGAATTGGTCTCGGCAAATCTTAGAGGGTCTTGTTTATCTTCACGGCCACGATCCCCCGGTGATCCATAGGGACCTAAAATGTGACAACATATTTGTCAATGGCCACCTTGGACAAGTGAAAATTGGAGACCTTGGGCTAGCTGCAATCCTTCGCGGCTCGCAGTCGGCACACAGCGTTATAGGCACACCGGAGTTCATGGCACCGGAGTTGTACGAGGAAGATTACAACGAACTTGTTGATGTGTACTCATTTGGAATGTGTTTATTGGAAATGCTTACATCTGATTATCCATATTGTGAATGCACTAATCCAGCACAGATATACAAGAAAGTAACGGCGGGGAAGTTACCAATGGCATTCTTCCGAGTTGAAGATGCCGAAGCGCAGAGGTTCATCGGAAGATGCCTGCTACCGGCGGCAAAGAGACCATCAGCAAAAGATTTGTTGCATGACCCTTTCTTTCTGTCTCTTGATTCTTCATCATCATCTTTAACAAAATTTGGAATTCAGAACTATTCACTTCTGAATAGTGAGATGGAAAAGCTACAATTGAGTGATGCTTTGCCTAGAACTGAAATGAAAATCATTGGGAAGCTTAATCCTGATGATACCATCTTTCTCAAAGTCCAACTTTCTGATAAGGATGGCTCCGTGAGGAATGTATATTTTCCCTTTGACATTGTGAGTGATACTCCGATTGATGTTGCCACGGAGATGGTGAAGGAATTAGATATTGGTGATTGGGAGCCTTTTGAAATTGCAACTATGATTGATGGCGAAGTCTCTGCTCTGCTGCCACAACGGAAGCTGATGAGTAATCATGACGAATTTGACGACGACGACGGAGGATCTCATCATCATTTTCGGTCCTTCTCTTCTTGCTCCTCCTCCCAAGAATCAATGGCAGGTCTATTTCCAAAATCCGAGGGCATGCATAATGAATATTACTGGCTCCATGATGATTTTGTTGACGACACAAGCTCACAAGGGACGTATTCCAACCTGAACTATCATTCAGCGGATGAACTTGACTATGTCTATAATAATAATAATAATAATTTAGCTTCTTGTACCAAAAAAGACAAAATTCCCATCATGAAGAGTCACACCCACAAGTGCGCAACACAACTAGCACCTTGTAGCAGTAGCCTCAAAGGTAAGAGGGTGGTGGAGAACGGTAATAGTAGTAATAGTAGATTAACAAGGAACAGGTCATTGATTGATATAAGGAGCCAATTGTTGCATAGATCATTGGTTGAGGAAGTTCACAAGAGAAGGTTGTCTAAAACTGTTGGTGCTGTTGAGAATATTGGATTCCAAGCACCTTGTCAAGTTGTTGACAATAATGACATGAGCCATTCAAGGAGTAGTGCCAAGGGAGAAAAAGTTGCCAGATAA 1680 0.4238 MKTVYKAIDEVLGIEVAWNQVKINEALRTPDNLQRLYSEVHLLGTLKHQSIIRFYTSWIDVENKAFNFVTEMFTSGSLREYRKKYKRVKIRAIKNWSRQILEGLVYLHGHDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSQSAHSVIGTPEFMAPELYEEDYNELVDVYSFGMCLLEMLTSDYPYCECTNPAQIYKKVTAGKLPMAFFRVEDAEAQRFIGRCLLPAAKRPSAKDLLHDPFFLSLDSSSSSLTKFGIQNYSLLNSEMEKLQLSDALPRTEMKIIGKLNPDDTIFLKVQLSDKDGSVRNVYFPFDIVSDTPIDVATEMVKELDIGDWEPFEIATMIDGEVSALLPQRKLMSNHDEFDDDDGGSHHHFRSFSSCSSSQESMAGLFPKSEGMHNEYYWLHDDFVDDTSSQGTYSNLNYHSADELDYVYNNNNNNLASCTKKDKIPIMKSHTHKCATQLAPCSSSLKGKRVVENGNSSNSRLTRNRSLIDIRSQLLHRSLVEEVHKRRLSKTVGAVENIGFQAPCQVVDNNDMSHSRSSAKGEKVAR 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151281g00009 559 SMART serkin_6 3 248 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151281g00009 559 CDD STKc_WNK 2 248 - -
Stsc151281g00009 559 Pfam Protein kinase domain 3 248 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151281g00009 559 ProSiteProfiles Protein kinase domain profile. 1 248 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151281g00009 559 FunFam Probable serine/threonine-protein kinase WNK1 1 71 - -
Stsc151281g00009 559 SUPERFAMILY Protein kinase-like (PK-like) 3 264 IPR011009 -
Stsc151281g00009 559 FunFam probable serine/threonine-protein kinase WNK9 73 253 - -
Stsc151281g00009 559 ProSitePatterns Serine/Threonine protein kinases active-site signature. 114 126 IPR008271 GO:0004672|GO:0006468
Stsc151281g00009 559 Gene3D Transferase(Phosphotransferase) domain 1 73 253 - -
Stsc151281g00009 559 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 1 468 - -
Stsc151281g00009 559 Gene3D Phosphorylase Kinase; domain 1 1 71 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151281g00009 Stsc-Chr151281 54364 57778 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151281g00009 1 539 MAP Kinase Kinase Kinase AT5G58350 56.679 0.0 573
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Stsc151281g00009 Pkinase 3.4e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151281g00009 K08867 - gmx:100272203 733.791