Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151281g00007 ATGGGCAATAACAAGTTCAGATTTTCAGATATGATACCAAATGCTTGGTTCTATAAGCTCAAAGATATGAGCAAATCAAGGAAGAGAAATGGGTCTCATCATCATCATCATCATGTTTTGAAGAACAAGAGCAATAGCAAGGTTACTTCACCAACAGCATCACAAAGGTCGCATCCAAGGTGTTCGAGTTATTTACCCAATGAACCTTTTATAAGAGCTGGTAAGTTGTATAACACAACAATTCACAACAACAAAGACTTTTTTGGTGGCAACATTATTCCATTTCCATTCACTGATTCTTCTTCACCAAGAATGTCATCATCAAAGAGAAGGTCTAGGAGAAAAACCATTTACAAGCCTTCTCCAACTGTTGTTTCTTCTTCTTCTAATTCAACTTTCATGGCCAATTCTAACTTTGATTCTTCAGCACACAACAATCTTCAGTCACCAGATTATGATGCTTCTTCCGTTGAAAGCTCATCTGAATCTGATGATGATTTCCATGAATATGTGTACTCTGACTCTGAATGTGATAGCTTTTCGGTCCCGGATTTGCTTAATGGTATAGACTCAAATTGCAGTTGCAGGGTTAGTTCTTCAACAAATGACATCATAATTGACATGAACAATGAACATTTCAAGGGGAACATGGGTAAGAAAGATGGGCTTGAGACGATTTCGCAATTAGGCCTTGCTCCTATAATGACAAAGTCAGAGAGGTTTGATGATAAGGTCATTGAATTCGAAGCTGCGGAGTTCAGGAGAAGTTCATCTGAGTTGGATAATGATCTGCAGTGTGATGAGTCTCTCAATGCCAAATCCAGCATAGAGGAAAGCAATGGCAGAGCACATAGGCGGCGAAAAAGTGGTCATGTATCTCGCCGGCCGCCTACTAACTCTCCGACCGGAATAAGGCTGAGAGTCAATTCTCCAAAATTAGCTAGCAGAAAGATTCAAGCCTATGCAAGAAGAAGTGTTTCTTCCAATGGAAGCAAGCTTTCAAGGAATGCAGGGTTTCCAGACGGATTCGCCGTGGTTAAGTCCTCATTTGATCCACAAAGCGACTTTAGGGATTCAATGTTGGAGATGATCATCGAGAACAATATCCGTGCGTCAAAGGATCTGGAGGACTTGCTTGCCTGCTACCTCTCCCTGAATTCAAGTGAATTCCATGATCTCATTGTTAAAGCATTTGAGCAGATTTGGTTTGAGTTTGCTCAACTTAGAATGTAA 1233 0.4047 MGNNKFRFSDMIPNAWFYKLKDMSKSRKRNGSHHHHHHVLKNKSNSKVTSPTASQRSHPRCSSYLPNEPFIRAGKLYNTTIHNNKDFFGGNIIPFPFTDSSSPRMSSSKRRSRRKTIYKPSPTVVSSSSNSTFMANSNFDSSAHNNLQSPDYDASSVESSSESDDDFHEYVYSDSECDSFSVPDLLNGIDSNCSCRVSSSTNDIIIDMNNEHFKGNMGKKDGLETISQLGLAPIMTKSERFDDKVIEFEAAEFRRSSSELDNDLQCDESLNAKSSIEESNGRAHRRRKSGHVSRRPPTNSPTGIRLRVNSPKLASRKIQAYARRSVSSNGSKLSRNAGFPDGFAVVKSSFDPQSDFRDSMLEMIIENNIRASKDLEDLLACYLSLNSSEFHDLIVKAFEQIWFEFAQLRM 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151281g00007 410 MobiDBLite consensus disorder prediction 44 62 - -
Stsc151281g00007 410 Pfam DNA-binding domain 1 46 IPR025830 GO:0003677
Stsc151281g00007 410 MobiDBLite consensus disorder prediction 27 43 - -
Stsc151281g00007 410 MobiDBLite consensus disorder prediction 99 130 - -
Stsc151281g00007 410 Pfam Transcriptional repressor, ovate 349 404 IPR006458 -
Stsc151281g00007 410 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 62 405 IPR038933 GO:0045892
Stsc151281g00007 410 MobiDBLite consensus disorder prediction 272 306 - -
Stsc151281g00007 410 ProSiteProfiles OVATE domain profile. 345 404 IPR006458 -
Stsc151281g00007 410 MobiDBLite consensus disorder prediction 27 65 - -
Stsc151281g00007 410 NCBIfam uncharacterized plant-specific domain TIGR01568 343 405 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151281g00007 Stsc-Chr151281 32864 34188 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Stsc151281g00007 Ovate 9.9e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151281g00007 - - adu:107458115 607.446