Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151275g00003 ATGATTTGCACTTTGAGACAACCTAGTACAGGGATCACTGGTTCTGGTTTTGTTTTGAGGCAAAAACATGCAACCCCATTTCAACCATCTTCATTATTCTTACCTCCTTTGGGGTTAAAGAAACCAACCCAGAATCATGTTGTTTCGTTGAACAAACCACTCCACCTTGGTGCTGTGAATTTTGGGTCAGTGAAGAAGGATTTTGAGGTTGTTGGAAAGAGAAAGAGTGATGGTGATGGTGATTTGGTGAAGTGTGGTGCATATGAGGCAGATAGATCAGAGATTGAAGCAGCTGGTCCATCAGAGGCTGCAAAGAAGGTGAAGATTGGGATTTACTTTGCAACATGGTGGGCTTTGAATGTTGTTTTCAATATTTATAACAAGAAGGTGTTGAATGCATACCCTTATCCATGGCTCACATCAACACTCTCACTTGCTTGTGGCTCTCTCATGATGTTGATCTCTTGGGCCACTAGGATAGCTGAAGCCCCCAAGACTGATCTTGAGTTTTGGAAGACTTTGTTGCCTGTTGCTGTTGCACACACAATAGGACATGTTGCTGCAACTGTTAGCATGTCGAAAGTTGCAGTGTCTTTTACTCATATCATCAAGAGTGGTGAACCTGCTTTCAGTGTCTTGGTTTCCAGATTCCTCCTCGGGGAGACCTTTCCTGTGCCGGTCTATCTGTCTTTGGTTCCGATTATCGGTGGATGTGCACTTGCTGCCGTTACCGAGCTCAATTTCAATATGACTGGTTTCATGGGGGCTATGATATCGAATATGGCATTTGTGTTCCGTAATATCTTTTCAAAGAAGGGCATGAAAGGAAACTCTGTCAGCGGAATGAATTACTATGCATGCTTATCTATTTTATCCCTTGCACTTCTCACGCCATTCGCAATAGCCGTGGAAGGGCCACAGATGTGGGCGGCCGGATGGCAAGCGGCCGTCTCTCAAGTTGGACCTCAATTCATATGGTGGGTAGCAGCTCAAAGCGTATTCTACCATCTATACAACCAAGTGTCATACATGTCATTGGATGAGATCTCGCCTTTGACCTTTAGCATCGGAAACACCATGAAACGTATTTCGGTCATAGTTTCTTCCATCATTATCTTCCGTACTCCAGTTCAGCCCGTCAATGCTCTCGGAGCTGCCATAGCCGTCCTCGGAACCTTCTTATATTCACAGGCAAAACAATAG 1203 0.4464 MICTLRQPSTGITGSGFVLRQKHATPFQPSSLFLPPLGLKKPTQNHVVSLNKPLHLGAVNFGSVKKDFEVVGKRKSDGDGDLVKCGAYEADRSEIEAAGPSEAAKKVKIGIYFATWWALNVVFNIYNKKVLNAYPYPWLTSTLSLACGSLMMLISWATRIAEAPKTDLEFWKTLLPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLLGETFPVPVYLSLVPIIGGCALAAVTELNFNMTGFMGAMISNMAFVFRNIFSKKGMKGNSVSGMNYYACLSILSLALLTPFAIAVEGPQMWAAGWQAAVSQVGPQFIWWVAAQSVFYHLYNQVSYMSLDEISPLTFSIGNTMKRISVIVSSIIIFRTPVQPVNALGAAIAVLGTFLYSQAKQ 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151275g00003 400 Pfam Triose-phosphate Transporter family 108 396 IPR004853 -
Stsc151275g00003 400 SUPERFAMILY Multidrug resistance efflux transporter EmrE 151 243 - -
Stsc151275g00003 400 PANTHER SOLUTE CARRIER FAMILY 35 108 399 - -
Stsc151275g00003 400 NCBIfam Tpt phosphate/phosphoenolpyruvate translocator 108 399 IPR004696 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151275g00003 Stsc-Chr151275 18476 21691 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151275g00003 29 400 Antiporters AT1G61800 77.225 0.0 562
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151275g00003 K15283 - gmx:100801832 640.958