Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151273g00005 ATGGCAGCTTCCCGGGCAAAGAAGAAGGCATGCGTGACCGGTGCCGGTGGTTTTGTAGCTTCTTGGCTGGTTAAGCTTCTCCTTTCCAAAGGATACATCGTTCATAGCACTGTTAGAAAACCTGGTGATGAGAAATATGCTCACTTGATGAAGCTTGAGGGAGCTTCTGAGAAACTAAAACTAGTTCAAAGCAGATTTGTTATGAATCCATTCACTCGGCAATTGTTGGATGTAGTGCAGTTTTCCATGTTGCTTGCCCTGTACCAGCAACAACTTTAG 279 0.448 MAASRAKKKACVTGAGGFVASWLVKLLLSKGYIVHSTVRKPGDEKYAHLMKLEGASEKLKLVQSRFVMNPFTRQLLDVVQFSMLLALYQQQL 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151273g00005 92 Gene3D - 2 81 - -
Stsc151273g00005 92 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 9 70 - -
Stsc151273g00005 92 Pfam NAD dependent epimerase/dehydratase family 10 64 IPR001509 -
Stsc151273g00005 92 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 6 63 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151273g00005 Stsc-Chr151273 20639 21192 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151273g00005 7 64 Monolignol Biosynthesis Gene Families AT1G76470 67.241 3.43e-22 85.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151273g00005 - - aip:110266234 110.538