Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151268g00003 ATGGCGATTATCGTCGAGCTTAACAAGAACACTGAAAACCGTGCTAAGTTAGTTGAAGAGATTGTGAAGTTGGAGAGAAAGATCTTTCCCAAACACGAATCATACGCTGCATTCTTCGACAACGAACTCAAAAGGAAGAACGCTGGACTTCTTTACCTCCACGCCGATGGCGATCTCGCTGGCTATGTCATGTATTCTTGGCCTTCTTCCCTCTACGCCTCCATCACCAAGCTTGCAGTGAAGGAGCAATGGAGGAAGCAAGGTCATGGCGAGGCACTGCTGAAAGCAGCGATTCAGAAATGCAAGACAAGGAAGGTTTCGCGCATAATGCTTCATGTGGATCCCTCAAGGACACCAGCAGTAAGCCTTTACAAGAAACTTGGTTTTCAAGTTGATCGCTTGATTGAAGGTTACTACTCCTTGGAAAGACATGCATATGTAATGTATTTGGAACTCAATTCAAATTGA 468 0.4487 MAIIVELNKNTENRAKLVEEIVKLERKIFPKHESYAAFFDNELKRKNAGLLYLHADGDLAGYVMYSWPSSLYASITKLAVKEQWRKQGHGEALLKAAIQKCKTRKVSRIMLHVDPSRTPAVSLYKKLGFQVDRLIEGYYSLERHAYVMYLELNSN 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151268g00003 155 CDD NAT_SF 56 112 - -
Stsc151268g00003 155 Coils Coil 7 27 - -
Stsc151268g00003 155 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 3 154 - -
Stsc151268g00003 155 Gene3D - 13 155 - -
Stsc151268g00003 155 Pfam Acetyltransferase (GNAT) family 21 129 IPR000182 GO:0016747
Stsc151268g00003 155 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 5 153 IPR000182 GO:0016747
Stsc151268g00003 155 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 18 152 IPR016181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151268g00003 Stsc-Chr151268 16307 18539 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Stsc151268g00003 Acetyltransf_1 6.2e-18 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151268g00003 - - adu:107477875 294.278