Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151262g00012 ATGTCTAAGGATACTAATTATTCTTCGTTACCCGTTAGCTCCTATCTAGAATTGCAACCTCAGAATGATTCCCCTGAATCCCTCCGTGGCCTCTCTTTCGACGATGAAACCGAGTATTTGGGCTCTAAGGCTGCACATCATGACGATGATTTTGAAATCGACATTGATAATTATCCGCTTGTTGTTATTGGCCATAATCATGGTTCCGGGGTGCCCGGAGCTGTCTTTAATTTGACTACCACCATCATAGGTGCAGGGATGATGGCCCTCCCTGCTACCATGAAGGTTCTTGGAGTGGTTTTGGGGGTTGTATTAATCATTCTTATAGGGATTTTATCCGAGATTAGTGTAGAATTGTTGGTTAGATATTCAGTTTTGGTTAAAGCTTCCTCCTACGGGGAGGTTGTTCAACATGCTATGGGAAAGACTGCCAGGATTTTGTCTGAGATCTGTATCATACTCAACAATGGCGGTGTTCTCGTCGTTTACTTGATAATCATGGGCGATGTTATGTCTGGTAATGTTCACCATTTGGGGGTTTTTGACCAGCTGATGGGGAATGGTGTCTGGGATCACAGAAAGCTTGTTATTCTTGTTATCATGGTGGTTTTCCTCGCCCCTCTTTGTTCCCTTGACAAGATCGATTCCTTGAGCATGACTTCCGCTGCCTCCGTGGCTCTCGCCGTTGTCTTTGTTGTAGTTACCTTCTCTGTTGCCTTCATTAAGATTGTTGAAGGACGGATTGAGGCTCCTCGGTTGGGTCCTGATCTGAGCTCAAAGACAGCCATCTTGGATTTGCTTGTGGTGATTCCAATCATGACCAATGCATTTGTCTGCCATTTTAACGTGCAGCCAATATACAATGAGCTCGCAGGGCGGTCTCCTCAGAAGATGAATCGAGTGGGAAGGATCACCTTAATGCTGTGCATCCTAGTTTATATCTCAACAGCAATGTCTGGTTTTCTACTATTTGGGAAAGACACAGAGTCTGATGTGTTGACTAATTTTGACGAGGATCTTGGAGTTCGTTATAGCGCAGCCTTAGACTACATTGTCAGGATTGGCTACATTCTCCACTTGATACTTGTTTTTCCTGTCATTCATTTCTCCCTGAGGCAGACAGTGAATGCTTTGTTGTTTGAGGGATCGCCTCCTCTATCCGAAAGCAGGAAGAGATCCTTGGGGCTCACAGCAGTTTTGTTGGTTCTCATATATATTGGATCTACCATGATTCCAAACATCTGGACAGCTTTTAAGTTCACAGGGGCAACAACGGCACTTACATTGGGATTTATGTTTCCCTCTATTGTTGTGTTGAGATTAGGCCATCTAGGGGGGTTGAGCCAAGGAGAATGGATTCTATCATGGTTTATGTTGGTACTTTCAGTGGTGGTTAGCATAATTGGAGTCATTGGTAATGTCTACAGCATTCAGAGCAAGTCTGAGTGA 1449 0.4424 MSKDTNYSSLPVSSYLELQPQNDSPESLRGLSFDDETEYLGSKAAHHDDDFEIDIDNYPLVVIGHNHGSGVPGAVFNLTTTIIGAGMMALPATMKVLGVVLGVVLIILIGILSEISVELLVRYSVLVKASSYGEVVQHAMGKTARILSEICIILNNGGVLVVYLIIMGDVMSGNVHHLGVFDQLMGNGVWDHRKLVILVIMVVFLAPLCSLDKIDSLSMTSAASVALAVVFVVVTFSVAFIKIVEGRIEAPRLGPDLSSKTAILDLLVVIPIMTNAFVCHFNVQPIYNELAGRSPQKMNRVGRITLMLCILVYISTAMSGFLLFGKDTESDVLTNFDEDLGVRYSAALDYIVRIGYILHLILVFPVIHFSLRQTVNALLFEGSPPLSESRKRSLGLTAVLLVLIYIGSTMIPNIWTAFKFTGATTALTLGFMFPSIVVLRLGHLGGLSQGEWILSWFMLVLSVVVSIIGVIGNVYSIQSKSE 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151262g00012 482 Pfam Transmembrane amino acid transporter protein 68 472 IPR013057 -
Stsc151262g00012 482 PANTHER AMINO ACID TRANSPORTER 66 467 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151262g00012 Stsc-Chr151262 47455 49337 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151262g00012 4 482 Amino Acid or Auxin Permease AAAP Family AT1G80510 70.265 0.0 652
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151262g00012 - - gmx:100791860 724.546