Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151261g00011 ATGGGATCATGCGTGTCAGTGACAGTGGAAATAGGGCCTCGTGCTCCAATCTCTGATGATGAGAATGAGAATAGCGGAGGAAATCGGAATGAGAAGCGGCGACGGAGGAGGAGGAGGACACAGTCACAGATACAACCACAACCACATTCAATCCCAGTTCACCGCCGTTTTCCTTCCTCTTCCGCTGGCTTCGATTACAGGATGGATGAAGAAAGCTTGCACATAATTCCTGGCAGACTCTTTCTCAATGGATCCTCCCGCTTTGGTTCCTTGTATTGTAAGCAAGGTAGAAAAGGCTACAACCAAGATGCTATGCTTCTTTGGGAGAACGTTTGCTCAAAAGAGGACACCTTTTTTTGTGGTGTGTTTGATGGGCATGGACCCCATGGGCATAAGGTTTCAAAGAAAGTGAGGGATTCCTTCCCTCTAATCCTTATGGCTGAATGGGATTTCCATGTTGGTAACAATAAAGATAGACTCTGCAGCAGTTCCGGCGCTGAAGAGAAACCTAACCAAGAGAGACCTAACACAGCTGCTTTCGCGGCTGTTACAGAATCTTACGTGAGGGCTTGTAAGGTTATGGACAACGAACTCAGGATGCAGGATGAATTTGACTCCTTTTGCAGTGGGACTACAGCAGTTACCTTGGTTAGGAAGGGACAGCACCTAGTTATCGGAAATGTTGGGGACTCGAGAGCTGTGTTGTGGGAAGCAGAGAGGATAAGGCTTTCCAAGGGAAGGATATTTGGCCTTCCGCATGAACCAGAGGTAGCTCGAGTATGGCTGCCTAACATTGATTCCCCAGGGCTTGCTATGTCGCGAGCTTTTGGAGATTATTGCCTGAAGGACTTCGGCCTCATCTCTCTTCCTCATGTCTCCTATCATCACATCTCCGACAAGGATGAATTTGTTGTATTAGCTACTGATGGGATTTGGGATGTGTTATCAAACAGAGAAGTACTGGGCATTGTGGGCAGTGTGCCGCAATCGTGTGCAGCTCGAATAGTCGTGGACTCGGCTGTTCATGCATGGAGGACTAAGTTCCCCGCTGCCAAGATAGACGATTGTTCTGTCGTGTGCCTCTTCTTTGATTCAGATTCAGATCAGTGTAAGTCGCCATCCGCTGCAGAAGACATGGTGATGATGGATGAGCAATCTGAAGTTGGCACTATATTATCTGCAACTAACACTATGGTAAATAGTTGGCCCAATCCAATCAATGAAACAAGGAACCAACACCACCGCTAA 1248 0.4744 MGSCVSVTVEIGPRAPISDDENENSGGNRNEKRRRRRRRTQSQIQPQPHSIPVHRRFPSSSAGFDYRMDEESLHIIPGRLFLNGSSRFGSLYCKQGRKGYNQDAMLLWENVCSKEDTFFCGVFDGHGPHGHKVSKKVRDSFPLILMAEWDFHVGNNKDRLCSSSGAEEKPNQERPNTAAFAAVTESYVRACKVMDNELRMQDEFDSFCSGTTAVTLVRKGQHLVIGNVGDSRAVLWEAERIRLSKGRIFGLPHEPEVARVWLPNIDSPGLAMSRAFGDYCLKDFGLISLPHVSYHHISDKDEFVVLATDGIWDVLSNREVLGIVGSVPQSCAARIVVDSAVHAWRTKFPAAKIDDCSVVCLFFDSDSDQCKSPSAAEDMVMMDEQSEVGTILSATNTMVNSWPNPINETRNQHHR 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151261g00011 415 Gene3D - 83 371 IPR036457 -
Stsc151261g00011 415 SMART PP2C_4 77 361 IPR001932 -
Stsc151261g00011 415 SUPERFAMILY PP2C-like 90 364 IPR036457 -
Stsc151261g00011 415 ProSiteProfiles PPM-type phosphatase domain profile. 88 363 IPR001932 -
Stsc151261g00011 415 PANTHER PROTEIN PHOSPHATASE 42 361 IPR015655 GO:0004722|GO:0006470
Stsc151261g00011 415 MobiDBLite consensus disorder prediction 10 58 - -
Stsc151261g00011 415 Pfam Protein phosphatase 2C 95 326 IPR001932 -
Stsc151261g00011 415 CDD PP2Cc 87 363 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151261g00011 Stsc-Chr151261 50934 52973 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151261g00011 73 367 PP2C-type Phosphatase Gene Family AT1G16220 47.305 7.84e-108 325
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151261g00011 - - gmx:100802479 401.749