Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151261g00004 ATGGAGAAATCCTTCAGCTTTTCAGCATATCATTTTAGCGCTCCTCCGAGACACAGCAGAGACAAGGATTCTGAAGCTTCATCATCTAATCGCGGCCACCACCAATGGAAATCATCAGGAGGAGAGGAGGATCATCAACCCGAAGACCACGACTCCATCCTCCGAGTCTCGGAGGATGTGGATCGTTTCCTTGAAACCAGTGCCACCACTCCTCCTCTTCTCCAAGTCCCTGATTGCATCCCTCAACTAGCAAAGATCTTGGATTCCATGGTGTACAGATACAACACCGGTAAAAGAAAGTTCGGCAAAGACGAAGAAAATGATGAATTGTTTCTGGCCGCGGTGGATCGCATCTCTAAGACCTCTGTCATTCTCGCTACCTTTCCCTGCGATCCCTCTGCCTTCGACAAAACTACCTTCTCCCTCGAGAAAGCTATGTCTTTCTTGGAGAAACATCTCTGCACTATTTTGCAGGATCCTAAATCCTCCACCGCCTCCGCCACCCCCACCACCCACTACCACGGCAACTTTCAATCTGATTTCAAACCCAAACCCCCTAAGAAATCATCCTCTTTCGATTCCCTTACTCAAATTCAGGATGAAATCTGTTCTACCTGTGTCCTTGAAAATCTCAATGATCCCCTTGTAACCCTAGCGTCTCATCAAGATCAAGATTCATCAAATAGTAACCAGTACTTCCCGGCATTCTCCCCGGAGAAAGTCTCCCTCATGAACAAGATCGCCACCGCCATGATCGCCGCGGGATATCAAACCGAGTGTTGCGTGGCCTTTGCCAGCTTCAGGCGGATCGCATTCAAGACCGCGCTGCAAGAATTCGGTTACGCGAGCGTCGGCATGGAAGAGATCCATAAGATGCAGTGGGAAGCCTTGGAAGGAGTGATCGCCACGTGGAACAACGCGGTTCGACATTGCGTAACCGTCTTGTTCAACGGAGAACGAAGGCTCTACAACTCAGTCTTCCCCAATCAACAATCCATATCTCAAAACCTCTTGAGCGATCTCGCACGCGCCGTGATCATTCATTTCATGAACTTCGCACAAGGCGTGGTGCTATCATTGCTAACCGTGGAGAAGCTTTTCAAGTTCCTTGACATGTATGAAACACTAAGGGATGTGGTGGAGCCCGCCATCGCCGGCGGCTCTTACCTCGAGAGGTGCAAGAAGGAGCTAGCTCAAGAGATAGCCACCACCAAGATTCGAATAGTGGAATCTACCTTGGCCATGTTTCGTGACCTAGAAAGTTCCGTTAAGGGCGACAGCGAGAGGGTTCCGGTTCCCAACGGTGCAGTCCATCCGTTAACGCGCTACGTCGTGAATTATCTTGAATATGCTTGCGAGTACAAGGAAACATTGGAACAGGTGCTACGGCAATGCCTTCACGATGATCGTAAGGTTGAGCTAGAGCAAGACGAAGAGACCCCCAAGAAATCTTACTTGGGGGTTCAGTTAATGACAATCATGGACTTACTCAACTTGAATCTTGAAAATAAGTCCATGCTGTATAAGGACTCTGCTTTGAGATGGGTTTTCTTGATGAACAATGGGAGGTACATAGTTCAGAAGGTGAAGGGGTGCCAAGAGCTTCACCAATGCATGGGTGATGATTGGTGTAGAAAGAGGCAATCATGGTTAAAACTGTACCATAAAAATTACCGGAAAGACACATGGTCTAAGGTGTTGCAGTGCCTTAACCCAGATGGATTGCAAGGGAACATAAGTGTGGTGAGTCCCAAAGACAACAACAAAGATAAAGTGTCAAAACAAATGCTAAAAGATAAGTTTAAGAGTTTCAATAGCACGTTTGAAGACATATACAAAACGCAGAGCTCTTGGGTGGTTAGTGATGAACAGCTTAAGTCTGAGCTCAGGGCTTCAATTGCTGCTTTGGTGATCCCAGCTTACAGATCATTTTTTGGAAGATTCAAGCACCATTTACAGTCTAGTAGACATGTTGACAAGTATATTAAGTATCATCCTGAAGATATTGAGGCTTTAATTGAAGAACTTTTTGACGGGAGTGCTAAAACCTTGCCTAAAAGGAGATCGTGA 2070 0.4671 MEKSFSFSAYHFSAPPRHSRDKDSEASSSNRGHHQWKSSGGEEDHQPEDHDSILRVSEDVDRFLETSATTPPLLQVPDCIPQLAKILDSMVYRYNTGKRKFGKDEENDELFLAAVDRISKTSVILATFPCDPSAFDKTTFSLEKAMSFLEKHLCTILQDPKSSTASATPTTHYHGNFQSDFKPKPPKKSSSFDSLTQIQDEICSTCVLENLNDPLVTLASHQDQDSSNSNQYFPAFSPEKVSLMNKIATAMIAAGYQTECCVAFASFRRIAFKTALQEFGYASVGMEEIHKMQWEALEGVIATWNNAVRHCVTVLFNGERRLYNSVFPNQQSISQNLLSDLARAVIIHFMNFAQGVVLSLLTVEKLFKFLDMYETLRDVVEPAIAGGSYLERCKKELAQEIATTKIRIVESTLAMFRDLESSVKGDSERVPVPNGAVHPLTRYVVNYLEYACEYKETLEQVLRQCLHDDRKVELEQDEETPKKSYLGVQLMTIMDLLNLNLENKSMLYKDSALRWVFLMNNGRYIVQKVKGCQELHQCMGDDWCRKRQSWLKLYHKNYRKDTWSKVLQCLNPDGLQGNISVVSPKDNNKDKVSKQMLKDKFKSFNSTFEDIYKTQSSWVVSDEQLKSELRASIAALVIPAYRSFFGRFKHHLQSSRHVDKYIKYHPEDIEALIEELFDGSAKTLPKRRS 689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151261g00004 689 Pfam Exo70 exocyst complex subunit 303 675 IPR046364 GO:0000145|GO:0005546|GO:0006887
Stsc151261g00004 689 Gene3D Exocyst complex component Exo70 96 687 - -
Stsc151261g00004 689 PANTHER EXOCYST COMPLEX PROTEIN EXO70 68 679 IPR004140 GO:0000145|GO:0006887
Stsc151261g00004 689 MobiDBLite consensus disorder prediction 1 49 - -
Stsc151261g00004 689 MobiDBLite consensus disorder prediction 15 49 - -
Stsc151261g00004 689 SUPERFAMILY Cullin repeat-like 102 678 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151261g00004 Stsc-Chr151261 15876 17945 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151261g00004 33 688 EXO70 exocyst subunit family AT5G13150 41.007 7.16e-178 520
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151261g00004 K07195 - adu:110275432 1064.68