Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151260g00002 ATGATGGCAACCTCGTTTGATGTCTCCAGAGGATGTTTCTCTTCACTTCCTTCCCTCCTTTTCCTCAAATCTCCCTCGTTTTCTCTTACATTACGTGCATGCAGGCCTTCATTTACAATGGCCATTAATTATCAAAGGGGATATAGAAGTAGAAGCATTGGCGTTGAACCCAAGTTTCCATTTCGGAGGGAAGCTGGTTTGAGTGGGAACTTAGAAGCTGTTGGAGTTCCAACCTCGGTGCCGGTGCGTGTGGCACACGAGCTTCTTCTTGCTGGCCATCGCTATTTGGATGTCAGGACTCCAGAAGAGTTCAATGCAGGACACGCTCCTGGCGCAATCAACATACCTTACATGTTCAGAGTTGGATCAGGGATGACAAAGAACACCAACTTCATTAAAGAGGTCTCCTCACAGTTCAGAAAAGAAGATGAAATTATTGTTGGGTGTCAGCTTGGTAAAAGGTCTATGATGGCTGCTACTGACTTATTAGCCGCTGGGTTCACCGGAGTGACGGACATAGCTGGTGGTTATGCGGCTTGGACCCAAAATGAACTTCCAACAGAACTTTGA 570 0.4649 MMATSFDVSRGCFSSLPSLLFLKSPSFSLTLRACRPSFTMAINYQRGYRSRSIGVEPKFPFRREAGLSGNLEAVGVPTSVPVRVAHELLLAGHRYLDVRTPEEFNAGHAPGAINIPYMFRVGSGMTKNTNFIKEVSSQFRKEDEIIVGCQLGKRSMMAATDLLAAGFTGVTDIAGGYAAWTQNELPTEL 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151260g00002 189 FunFam Thiosulfate sulfurtransferase 16, chloroplastic 68 188 - -
Stsc151260g00002 189 Gene3D - 69 188 IPR036873 -
Stsc151260g00002 189 SMART rhod_4 79 186 IPR001763 -
Stsc151260g00002 189 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 75 187 IPR036873 -
Stsc151260g00002 189 CDD RHOD 96 180 - -
Stsc151260g00002 189 ProSiteProfiles Rhodanese domain profile. 89 189 IPR001763 -
Stsc151260g00002 189 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 15, CHLOROPLASTIC 27 188 - -
Stsc151260g00002 189 Pfam Rhodanese-like domain 95 182 IPR001763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151260g00002 Stsc-Chr151260 21494 23438 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151260g00002 79 186 Sulfurtransferasese or Rhodanese AT5G66170 48.182 1.40e-32 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151260g00002 - - gmx:100305968 261.151