Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151260g00001 ATGACTTTGGCCATGTTCACTAATGGACTTAAACTGCCACCGTTGGTAGTTGGGGTGTTGCAGCACCATACAGTAAAATATGACTTTATGCACTCAGAAACAAAACATTTTCTAGGAGAACAAGCGCATCCCCAACCTTGTCGTTTTATATCTATTTATATACTCAAATATTGTATCCTTCTTCAACAGGTGGTCAAGGTTGCTGATTTTGGGGTAGCAAGAGTGCAAACTCAATCTGGAGTGATGACTGCTGAAACTGGAACATACCGCTGGATGGCTCCTGAGGTCATTGAACACAAACCATATGACCAGAAGGCAGATGTTTTTAGTTTTGGAATAGCTCTTTGGGAGCTTTTAACTGGAGAACTACCATACTCTTTCTTGACCCCATTGCAAGCAGCAGTTGGCGTGGTGCAGAAGGGCCTTCGGCCTACAATCCCCAAAAATACACATCCAAGACTATCTGAGCTGCTCCAGCGGTGCTGGCAGCAAGATCCGTTGCAGAGACCGGATTTCTCTGAAATTATAGAAATTCTTCAGCAGATAGCAAAAGAGGTCAATGATGATAAAGATCGACACAAAGAAAAGTCACCCCATTCCCACGGCTTTCTGTCATCACTACGACGTGCCCATCACTGA 639 0.4413 MTLAMFTNGLKLPPLVVGVLQHHTVKYDFMHSETKHFLGEQAHPQPCRFISIYILKYCILLQQVVKVADFGVARVQTQSGVMTAETGTYRWMAPEVIEHKPYDQKADVFSFGIALWELLTGELPYSFLTPLQAAVGVVQKGLRPTIPKNTHPRLSELLQRCWQQDPLQRPDFSEIIEILQQIAKEVNDDKDRHKEKSPHSHGFLSSLRRAHH 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151260g00001 212 MobiDBLite consensus disorder prediction 188 202 - -
Stsc151260g00001 212 Coils Coil 176 196 - -
Stsc151260g00001 212 SUPERFAMILY Protein kinase-like (PK-like) 63 179 IPR011009 -
Stsc151260g00001 212 Gene3D Transferase(Phosphotransferase) domain 1 47 206 - -
Stsc151260g00001 212 MobiDBLite consensus disorder prediction 188 212 - -
Stsc151260g00001 212 Pfam Protein tyrosine and serine/threonine kinase 62 179 IPR001245 GO:0004672|GO:0006468
Stsc151260g00001 212 ProSiteProfiles Protein kinase domain profile. 1 204 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151260g00001 212 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 59 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151260g00001 Stsc-Chr151260 19153 21331 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151260g00001 63 211 MAP Kinase Kinase Kinase AT4G35780 74.497 1.43e-76 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Stsc151260g00001 PK_Tyr_Ser-Thr 6.7e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151260g00001 - - gmx:100803377 273.863