Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151256g00006 ATGGCTGTCCCAAAAGTGAATGAAATGTTGCTTCAGGACCTGGAAGAAATGGGATTCCCACGGCCACGAGCAACCCGGGCACTTTATTATTCAGGCAACAAGAGCTTAGAGGATGCAATAATTTGGACAATTGATCATGAAAATGACCCTGATATTGATGTGATGCCACTGGTAGATGTAGACATTGATATTGATTCTTCTCAATCCTTCCCTATCACAGAAGAAATCAGAATCAAAGCACACAAGTTAAGGGAACAAGAGCGTACCAAGAAAGAGGAGGAACTAAAAAGATTGGAGAGAGAACGGGAGAAGGAGAGGATTCAAGCAGGTAAGAGAGTCCTTGAGGTGAAAAGAATTGCTGAAGAAAATGAAAGACAAAGGAACTTAGCCTTAAGAAAAGCAGAAAAGGAAGAAGAGAAAAGGGCAAGGGGAAAGGTTCTCCAAAAACTAGAACAGGACAAGATAAATAGAAGATCTAAGCATGGATCAATATTGCCTATGGAAAACGTAGCTAATGTCAGATTAGAGGCTACTACTTTGGAACAGCAAGATAAGATATTGCAGAAACCAAAACCTGTTTACACAACTGAAAAGGTTGATTACTTAAGGGAATGTTTGAGGTCTCTCAAGCGTAAACACCAGGCTGAGCAAGGCAGAGTCAGAAAGGCCTTCGAAACACTTTTAATTTATGTTCGAAATGTTGTCAAGAATCCCAACAATGAAAAGTACCGAAAGATCAGACTAAGCAATCCATTATTCCAGGAAAGAGTTGCAAGTATGAATGGAGGTGTGGAGTTTCTTGAACTATGTGGTTTTGAGAGAATCGGTGACTTGTTGTATCTACCTCATGAAAAGACTGACATAACATTACTAAATTCAGCTGGTGCTGTGTTAAATTCTGCAATGACAAATCCTTTCTTTGGACTTCTAAGTACTTAG 939 0.3962 MAVPKVNEMLLQDLEEMGFPRPRATRALYYSGNKSLEDAIIWTIDHENDPDIDVMPLVDVDIDIDSSQSFPITEEIRIKAHKLREQERTKKEEELKRLEREREKERIQAGKRVLEVKRIAEENERQRNLALRKAEKEEEKRARGKVLQKLEQDKINRRSKHGSILPMENVANVRLEATTLEQQDKILQKPKPVYTTEKVDYLRECLRSLKRKHQAEQGRVRKAFETLLIYVRNVVKNPNNEKYRKIRLSNPLFQERVASMNGGVEFLELCGFERIGDLLYLPHEKTDITLLNSAGAVLNSAMTNPFFGLLST 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151256g00006 312 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 5 46 IPR015940 -
Stsc151256g00006 312 Coils Coil 119 140 - -
Stsc151256g00006 312 Gene3D - 204 301 - -
Stsc151256g00006 312 Pfam UBA/TS-N domain 11 40 IPR015940 -
Stsc151256g00006 312 Pfam PUB domain 220 286 IPR018997 -
Stsc151256g00006 312 CDD UBA_PUB_plant 6 53 - -
Stsc151256g00006 312 SMART PGNneu 222 283 - -
Stsc151256g00006 312 SUPERFAMILY PUG domain-like 201 306 IPR036339 -
Stsc151256g00006 312 Gene3D - 8 52 - -
Stsc151256g00006 312 Coils Coil 81 108 - -
Stsc151256g00006 312 SUPERFAMILY UBA-like 5 55 IPR009060 GO:0005515
Stsc151256g00006 312 PANTHER F13M7.16 PROTEIN 1 310 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151256g00006 Stsc-Chr151256 20621 24505 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151256g00006 1 310 C2H2 Transcription Factor Family AT1G04850 54.313 5.63e-87 262
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151256g00006 - K24348 gmx:100781260 397.897