Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151250g00014 ATGTTGTTCCTTCACCGCCGTCTATGCACCACAGCCACCAGAACAGTGATCCCAAACCTCTCAAAGTCAAAGATTCCTTCAAGGTACAAGAGCCTTGCTCTTTCTCAAGCCCAGAAGATCCTCACCGATTACCTCCATTCCACAAGGTCCATCCCTTATGCCTTTGCTGATCAGATTGCTGCCAATTCCCACTCTTCTCTCTCCAACCTCATTTCAAAGGTCAGATTTTCAGCTCCATCTTTCTCCCGCACCCTCATCAGGTTCCTCAGGTACAACCCCATCAATGAATTTGAGTTCTTTTTTGAAAGCATTGGCATAAACTATACTCAAGTTCCTAACTTGTTGCAACCCCATAAGTTTTTCTTCTCTGAGGATGGTTCCCTTTTGGATGCTGCTTCTGTGCTTTATGAATTCGGGTTTCCTTGGGATAAGCTTGGTTTGCTTTATGTGGAACGTTGTTCTGTGTTTAGGTGTAGTGTTCATGAGTTGAAGGGCATGCTTTGTGACCTCAAAAGTTATGGTTTTTGCAATGTTCAGGTCATTGGGATATGCTTGGCTTTCCCTTTTGTTTTCGGTGAGCGGGGAGGAGTGTTGGATGCTGAGATTGATAGGTTACTTGCTGATCTCAGGTTGGTTTTTCTGGATTTTGACTTGGCAGGGTGTGTTGAGGGAAATGCAGATTCTTGGTATGAAGTATGTAGGAAAATTCGGGTTTTTTACTATTTGAATGGTGAGAAGTATAAGATGGGGGAGCTCATTGGAAGGAACAAGAATGTGATTCTTGAGCATGGAGAAGAGGAGTTGGTGCTGAAAACTGTGTATTTTAGCAGGTTTGGTGTCAAGAAGGAGGAAGTAGCTCATTTGATCCTCCACGACTCAGAATTGTTGAATCTCGATCTGGAAACACCGGTGATTAGTGTATTGAAGCTCTTGACACACTTTGGGTTGAGCTCTGAGGATCTCAAGGATGTTCGGCAAAACTATGCTCATGCATTGGGAACAATAAAAATGGTTAATCTGCCTAATGTAATGAGGGCTTTGGGTCTAAGTAAGTGGTTCTTTAATAGGATAAAAGATGAGAAGCATCAACTCTTAGTGACTTATGTCACAAACTTTCCCAATGAAGACCAGGATAAAGGATATCAAGATGGTTTGAAGGCGATTGGTGCTACGAGAACCGCAGTTCACACCATGAATAAACTGAATTTCTTGCATTCCTTAGGGTTTGGAGAAAATGCCTTGACCCTGGCTGTCCTAACTTACTTGAATGGAACTAGCAGCGAGTTAGAAGAAAGATTCAATTGCCTTCTTCATTTAGGGATTGAATTCACAAAGCTCTGTAAGATAGTTGTAATGCGACCTAAGGTTCTAAGCCAACACCCGAAAATTACAGAGAAAAAGATTAAGTTCCTTTGTCAGGAAATGGGATCCTCTCTGGAGCTTTTGGACACTTTTCCAGGTTTCTTATGTTTTGACTTGGAAAACCGCATTAAACCTAGGTATAGATTCCATATGTGGATTAAAGAAAAGTGTTGTGTCAAAAAATTTTCTATGGCAACCTTGATTGCGACCAGCGAGAAGAACTTTATTTCTCATGCTTTTCGCATCCACCCAGCTGCTCCAAAACATTGGCTTGAGCAATTCTATCTCCGCAAATTGCCGGAGCGATGA 1671 0.4213 MLFLHRRLCTTATRTVIPNLSKSKIPSRYKSLALSQAQKILTDYLHSTRSIPYAFADQIAANSHSSLSNLISKVRFSAPSFSRTLIRFLRYNPINEFEFFFESIGINYTQVPNLLQPHKFFFSEDGSLLDAASVLYEFGFPWDKLGLLYVERCSVFRCSVHELKGMLCDLKSYGFCNVQVIGICLAFPFVFGERGGVLDAEIDRLLADLRLVFLDFDLAGCVEGNADSWYEVCRKIRVFYYLNGEKYKMGELIGRNKNVILEHGEEELVLKTVYFSRFGVKKEEVAHLILHDSELLNLDLETPVISVLKLLTHFGLSSEDLKDVRQNYAHALGTIKMVNLPNVMRALGLSKWFFNRIKDEKHQLLVTYVTNFPNEDQDKGYQDGLKAIGATRTAVHTMNKLNFLHSLGFGENALTLAVLTYLNGTSSELEERFNCLLHLGIEFTKLCKIVVMRPKVLSQHPKITEKKIKFLCQEMGSSLELLDTFPGFLCFDLENRIKPRYRFHMWIKEKCCVKKFSMATLIATSEKNFISHAFRIHPAAPKHWLEQFYLRKLPER 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151250g00014 556 SMART mt_12 286 317 IPR003690 GO:0003690|GO:0006355
Stsc151250g00014 556 SMART mt_12 250 281 IPR003690 GO:0003690|GO:0006355
Stsc151250g00014 556 SMART mt_12 447 478 IPR003690 GO:0003690|GO:0006355
Stsc151250g00014 556 SMART mt_12 479 511 IPR003690 GO:0003690|GO:0006355
Stsc151250g00014 556 Gene3D Transcription termination factor 3, mitochondrial 389 546 IPR038538 -
Stsc151250g00014 556 Gene3D Transcription termination factor 3, mitochondrial 68 215 IPR038538 -
Stsc151250g00014 556 Gene3D Transcription termination factor 3, mitochondrial 226 366 IPR038538 -
Stsc151250g00014 556 PANTHER CGI-12 PROTEIN-RELATED 38 535 IPR003690 GO:0003690|GO:0006355
Stsc151250g00014 556 Pfam mTERF 422 529 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151250g00014 Stsc-Chr151250 63167 65434 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Stsc151250g00014 mTERF 9.4e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151250g00014 - - aip:107624793 682.174