Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151250g00006 ATGGTGGTTCCACTCTTAACTCTAACCTTCCCTTGTGCTATTCATGGAGCTACACTCTCTCAGAGAAAACTAACTCTTCAATGCACAAATCATCAGGAAATATTACAGGGTAGTTTCATATCTGAGAGAATAACGACATTAAGGAGGAGATTCATTCTTTCTTCTTTTCTATCAACTTGTGTTTTTCCAACCCTATCTTCTTATGCCAAGACTAAGACTAAGAATCCATATGATGAAAAACGCCTCCTTCAACAAAATAAACGGATACAGCAAGAAAACAATGCACCAGAGGATTTCCCAAATTTCATCAGAGAAGGTTTTGAAGTTAAAGTAGTGGCACCGGATAACTATACGAAGCGCGATTCGGGGCTCATATACCGGGATTTTGAAGTTGGTAAAGGTGATTGCCCAAAGGATGGTCAGCAGGTAACCTTTCACTATGTCGGTTATAACGAATCTGGCCGTCGTATAGACAGCACTTACATACAGGGTTCTCCTGCCAGAATCCGGATGGGAACTAAAGCACTGGTTCCTGGATTTGAGGAAGGAATTAGAGACATGAGACCAGGTGGAAAGAGAAGAATCATTATTCCCCCTGAACTCGGGCCACCAGTGAGTTCCAACATGTCTCATTTTCTTGTTTTAGCAACAACTACTAGATAG 663 0.4148 MVVPLLTLTFPCAIHGATLSQRKLTLQCTNHQEILQGSFISERITTLRRRFILSSFLSTCVFPTLSSYAKTKTKNPYDEKRLLQQNKRIQQENNAPEDFPNFIREGFEVKVVAPDNYTKRDSGLIYRDFEVGKGDCPKDGQQVTFHYVGYNESGRRIDSTYIQGSPARIRMGTKALVPGFEEGIRDMRPGGKRRIIIPPELGPPVSSNMSHFLVLATTTR 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151250g00006 220 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 140 202 IPR001179 GO:0003755
Stsc151250g00006 220 SUPERFAMILY FKBP-like 61 202 - -
Stsc151250g00006 220 Gene3D - 72 211 IPR046357 GO:0003755
Stsc151250g00006 220 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 137 202 IPR001179 GO:0003755
Stsc151250g00006 220 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP20-2, CHLOROPLASTIC 9 207 IPR044239 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151250g00006 Stsc-Chr151250 11557 13689 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151250g00006 130 202 Calmodulin-binding Proteins AT5G48570 34.247 7.11e-09 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151250g00006 - - gmx:100305486 303.138