Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151250g00005 ATGCACAAATCATCAGGAAATGGTAGTTTCATATCTGAGAGAATAACGACATTAAGGAGGAGATTCATTCTTTCTTCTTTTCTATCAACTTGTGTTTTTCCAACCCTATCTTCTTATGCCAAGACTAAGACTAAGAATCCATATGATGAAAAACGCCTCCTTCAACAAAATAAACGGATACAGCAAGAAAACAATGCACCAGAGGATTTCCCAAATTTCATCAGAGAAGGTTTTGAAGTTAAAGTAGTGGCACCGGATAACTATACGAAGCGCGATTCGGGGCTCATATACCGGGATTTTGAAGTTGGTAAAGGTGATTGCCCAAAGGATGGTCAGCAGGTAACCTTTCACTATGTCGGTTATAACGAATCTGGCCGTCGTATAGACAGCACTTACATACAGGGTTCTCCTGCCAGAATCCGGATGGGAACTAAAGCACTGGTTCCTGGATTTGAGGAAGGAATTAGAGACATGAGACCAGGTGGAAAGAGAAGAATCATTATTCCCCCTGAACTCGGGCCACCAGTTGGACCTTCAACCTTTTTCAGCTCAAAACAATTTGAAGTTTTTGATGTTGAATTGTTAAGCATACAGAACTGTGAAAGGAGGACCATAGCTTTCTACTCTGATGTTGTATGCAACTGA 645 0.4109 MHKSSGNGSFISERITTLRRRFILSSFLSTCVFPTLSSYAKTKTKNPYDEKRLLQQNKRIQQENNAPEDFPNFIREGFEVKVVAPDNYTKRDSGLIYRDFEVGKGDCPKDGQQVTFHYVGYNESGRRIDSTYIQGSPARIRMGTKALVPGFEEGIRDMRPGGKRRIIIPPELGPPVGPSTFFSSKQFEVFDVELLSIQNCERRTIAFYSDVVCN 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151250g00005 214 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 108 194 IPR001179 GO:0003755
Stsc151250g00005 214 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 111 198 IPR001179 GO:0003755
Stsc151250g00005 214 SUPERFAMILY FKBP-like 32 198 - -
Stsc151250g00005 214 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP20-2, CHLOROPLASTIC 14 214 IPR044239 -
Stsc151250g00005 214 Gene3D - 50 206 IPR046357 GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151250g00005 Stsc-Chr151250 11338 13689 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151250g00005 101 200 Calmodulin-binding Proteins AT5G48570 32.353 2.36e-10 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151250g00005 - - gmx:100305486 360.918