Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151247g00015 ATGAACAAGCTCTTCCCTTCTCACACACTTCACGTTTCTAAGAAACCCGGCAAAGGAGGTTTCTCTTCTATCCAGTCAGCCATTGATTCTCTTCCGTTCATCAACCTTGTTAGAGTTGTAATTAAGGTCCATGCAGGGGTTTACACAGAGAAAGTTAACATCCCACAATTCAAATCGTTCATAACGATAGAAGGAGAAGGAGCAGACAAGACAATAGTTGAATGGGGTGACACTGCTGATAAGGCGGCTCCGGGGGCTAAAGGGCAACTGCTAGGAACGTACGGGTCTGCCACATTTGCAGTGAATTCAGCTTACTTCATAGGCAAGAACATGACATTCAAGAACACGGCACCCGTTCCGGCGAACGGAGCAGTAGGGAAGCAGGCAGTGGCGCTCAGAATTTCAGGAGACACAGCCATGTTTGTTGGATGCAAATTCTTGGGGGCACAGGACACACTTTATGATCACATGGGCAGGCATTACTACAAGGATTGTTACATTGAAGGCTCCGTTGATTTCATATTCGGCAACGCTCTCTCTTTATTTGAGGGGTGTCACGTGCATGCTATAGCACAGAATGTAGGAGCAGTAACAGCGCAAGGGAGAAGCAGCTTTTTGGAGGACACGGGGTTCTCATTTGTGCACTGCAAGGTCACGGGATCAGGGGCACTGTACCTTGGAAGGGCATGGGGTCCCTTCTCTCGTGTGGTCTTTGCTTACACTTACATGGACAATATCATCATTCCCAAAGGCTGGTATAACTGGGGTGATCCCAACCGTGAAATGACTGTATTCTATGGGCAGTACAAATGCACAGGACCTGGAGCAAGCTTTGCTGGGAGAGTAGCATGGTCAAGGGAACTCACCGATCAGGAAGCTAAACCATTTATTTCACTTGCCTACATTGATGGCTCTGAGTGGATCAAATCCCTCTTTTGA 939 0.4771 MNKLFPSHTLHVSKKPGKGGFSSIQSAIDSLPFINLVRVVIKVHAGVYTEKVNIPQFKSFITIEGEGADKTIVEWGDTADKAAPGAKGQLLGTYGSATFAVNSAYFIGKNMTFKNTAPVPANGAVGKQAVALRISGDTAMFVGCKFLGAQDTLYDHMGRHYYKDCYIEGSVDFIFGNALSLFEGCHVHAIAQNVGAVTAQGRSSFLEDTGFSFVHCKVTGSGALYLGRAWGPFSRVVFAYTYMDNIIIPKGWYNWGDPNREMTVFYGQYKCTGPGASFAGRVAWSRELTDQEAKPFISLAYIDGSEWIKSLF 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151247g00015 312 Pfam Pectinesterase 15 304 IPR000070 GO:0030599|GO:0042545
Stsc151247g00015 312 FunFam Pectinesterase 6 310 - -
Stsc151247g00015 312 ProSitePatterns Pectinesterase signature 2. 167 176 IPR033131 -
Stsc151247g00015 312 Gene3D - 7 311 IPR012334 -
Stsc151247g00015 312 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 7 309 - -
Stsc151247g00015 312 SUPERFAMILY Pectin lyase-like 6 310 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151247g00015 Stsc-Chr151247 60465 62196 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151247g00015 15 309 Carbohydrate Esterase AT1G05310 47.195 4.84e-100 298
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151247g00015 K01051 - gmx:100793773 565.844