Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151247g00001 ATGGACGACGAAGAGCACCTCCAGCGACTCGACTCTGAGCTGGCCTCTCTCAGTTCCAGCTCCGGCATTTCCTCAATTCTCAGCTTCGACGACTTGCGCGGCAGCAACACCAGCTCCGGCGACATTTCCTCCATCAGCAGTGGCTCCGGGGAGATTCCTCCCGCCGAGGCCGTACTCTTGCCTCCTCCTCTCAGGCGGACTATGTCGAGTGACGTAGAGGTTGTGGTGGCGGGAGCGGTCGGGGAGAAATGCGTGGGGAGGAAGAACAAGGGAGTGAGTTGGGGGCACACTTCCGTGATTGGGAGAAGGAAGGAGATGGAGGACGCCGTTGCCGTTATTCCCGGATTCATGTCCCGCACGTGCCACCACGTCGGCGGTTGTACGGCCCCTGGCTCCCAATCCTCCGGCGAGATCTCTCCCCTTCATTTCTTCGGAGTGTACGACGGTCACGGTGGCGCTCAGGTGGCTAAATTTTGTGCAAAGCGGATGCACGATGTGATAGCAGAGGAATGGGACCGGCAAACAGTGAGTTACAGTAGTGAATGGCAAAGAAGGTGGGAAGCCGTATTTTATAACGGTTTTGAAAGGACTGACAATGAGATATCATCAGACGAAGTTGCACCTGAAATGGTAGGATCTACAGCCTCTGTGGTGGTTCTATCTGGTTGCCAAATTATAACATCCAACTGCGGCGACTCAAGGGTCGTTCTTTGCCGCAGGGCTCAAACAATCCCCCTCACTGTCGATCAGAAGCCTGATAGACAAGATGAACTCTTGAGAATTGAAGGAGGAGGAGGAAAAGTCATAAACTGGAATGGAGCTAGGGTGTTTGGTGTTCTTGCCATGTCCAGGGCTATAGGTGATAGGTACTTGAGGCCATGGATCATTCCAGTGCCTGAGATAACCTTTACAGCAAGAAGTGAGGAGGATGAGTGCTTAATATTAGCAAGTGATGGACTCTGGGATGTGATGACGAATGAAGAGGTTGGTGAAGTTGCGCGGCATATTCTTAGAGGGCGACGAAGGTCCCTGTCGCTGGAGGAAATATCTCCAGCACAAGTTGTTGCAAATAGCCTGACTGAGATTGCTTATGCTAGAAATAGTAAGGATAACATTTCCATCATAGTAGTTGATCTGAAATCGAAGAGAAAACGTCAACCAAGACCTCCTTTAGTTGCCCGATAA 1185 0.5156 MDDEEHLQRLDSELASLSSSSGISSILSFDDLRGSNTSSGDISSISSGSGEIPPAEAVLLPPPLRRTMSSDVEVVVAGAVGEKCVGRKNKGVSWGHTSVIGRRKEMEDAVAVIPGFMSRTCHHVGGCTAPGSQSSGEISPLHFFGVYDGHGGAQVAKFCAKRMHDVIAEEWDRQTVSYSSEWQRRWEAVFYNGFERTDNEISSDEVAPEMVGSTASVVVLSGCQIITSNCGDSRVVLCRRAQTIPLTVDQKPDRQDELLRIEGGGGKVINWNGARVFGVLAMSRAIGDRYLRPWIIPVPEITFTARSEEDECLILASDGLWDVMTNEEVGEVARHILRGRRRSLSLEEISPAQVVANSLTEIAYARNSKDNISIIVVDLKSKRKRQPRPPLVAR 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151247g00001 394 MobiDBLite consensus disorder prediction 35 50 - -
Stsc151247g00001 394 MobiDBLite consensus disorder prediction 1 21 - -
Stsc151247g00001 394 ProSiteProfiles PPM-type phosphatase domain profile. 93 379 IPR001932 -
Stsc151247g00001 394 PANTHER PROTEIN PHOSPHATASE 68 379 IPR015655 GO:0004722|GO:0006470
Stsc151247g00001 394 FunFam Protein phosphatase 2C 51 86 387 - -
Stsc151247g00001 394 CDD PP2Cc 95 379 IPR001932 -
Stsc151247g00001 394 ProSitePatterns PPM-type phosphatase domain signature. 143 151 IPR000222 GO:0043169
Stsc151247g00001 394 SUPERFAMILY PP2C-like 88 380 IPR036457 -
Stsc151247g00001 394 Pfam Protein phosphatase 2C 103 372 IPR001932 -
Stsc151247g00001 394 Gene3D - 83 388 IPR036457 -
Stsc151247g00001 394 MobiDBLite consensus disorder prediction 35 57 - -
Stsc151247g00001 394 SMART PP2C_4 83 377 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151247g00001 Stsc-Chr151247 5202 10092 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151247g00001 94 389 PP2C-type Phosphatase Gene Family AT4G26080 50.314 9.08e-99 299
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151247g00001 K14497 - gmx:100793293 591.267