Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151246g00006 ATGGCAAAGCAGAAGAACGTTACTCTTCATGAAAACTCCGATGATGAAGAACCGCAGGTTCCCGTGACTCAGCCAGAGGAAGAAGAAGATAGCAGCGAGGAGGAGGAGGAAACAACTTCTTCCGACGAAGAAGACGATGAAGGAGGAGATGAACGGCACGAGATTGTCGTCAGGAAGCCACAGCCGCAAACCAGTTCCAAACCCTCGTCTTCCTCTTCTGAAGACGACTCGGATTCCGAGCCCGAACCTGAGCCCGAGCCCGAGCCGCAGAAAGTTAAACCCTCTTCAAAGGCGAAGTCTCAATCTTCAACGCCGGCGAGTCAAGCCAAATCTGGTTCATTGAAGCGCGGAGCAGAGAACAGCATCGAACACTCAACCCAGTCAAAACGTGGGAAGAAGGCTGTGGAGGATCATCATGCAGCTGGCTCTGATGAAGAGGATCAGAAGAAATCACGTGACGAGTCCAAATCCGCGTTTCAGAGGATTTTCAGCGAGAAAGATGAGATAGGTATCTTGAAGGGCATGACTGAGTTCACCTCCAAAACAGGGAAGGATCCTCATAAATGCTCTGATGAATTTTACGAATTTATGAAGGGATCCAAGTTGATCAGCTCCAATGCATCATGCAACCAATTGAAGGATAAGATCCGCCGGCTCAAGAAGAAGTTTGAGAACAATCTGAAGAAAAGGAAGAACGGCAAAGAGGCGACCTTATCAAAGCCGCACGAGTTGGAAGCCTTCAATTTGTCAAAGAATATTTGGGGTGGCGGCGGAGAAGCAGGGAGCAATGGAACTTCGAAAAATGTTAAGGTTAATAATGAGAAAGCTGTGAAGAGTACCCCCAAGAAGGCGATAGTGCCCCAATCGAATGGGAAACCTGAAGTAAAGTCCAAACTGAATTCTGAAGTTTTGGATTCAAATGAAGGTAAAGAGGTGGATGAATTGTCTGAGACTAGTTTAGCTTTGACTTCATTAATGAGGTATGATGGAGCTTTTGGTAAGACTTATGGCAAAGACTATATTAGGAATGGACTAGAGAAACTTGGAACCTCGAAGAGGGAAGAGTTAGAGGGCAGGTGGAGGAAGTTGCAAGAAGCTGAGAATGAATTGTACGTCCAGACAGCAGAATTCTATGCAGAACAAATTAAATTGATATTTCAAGCAAATAAATCGTCCTCCTAG 1182 0.4585 MAKQKNVTLHENSDDEEPQVPVTQPEEEEDSSEEEEETTSSDEEDDEGGDERHEIVVRKPQPQTSSKPSSSSSEDDSDSEPEPEPEPEPQKVKPSSKAKSQSSTPASQAKSGSLKRGAENSIEHSTQSKRGKKAVEDHHAAGSDEEDQKKSRDESKSAFQRIFSEKDEIGILKGMTEFTSKTGKDPHKCSDEFYEFMKGSKLISSNASCNQLKDKIRRLKKKFENNLKKRKNGKEATLSKPHELEAFNLSKNIWGGGGEAGSNGTSKNVKVNNEKAVKSTPKKAIVPQSNGKPEVKSKLNSEVLDSNEGKEVDELSETSLALTSLMRYDGAFGKTYGKDYIRNGLEKLGTSKREELEGRWRKLQEAENELYVQTAEFYAEQIKLIFQANKSSS 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151246g00006 393 MobiDBLite consensus disorder prediction 258 311 - -
Stsc151246g00006 393 Pfam Protein of unknown function, DUF573 159 255 IPR007592 GO:0006355
Stsc151246g00006 393 MobiDBLite consensus disorder prediction 1 166 - -
Stsc151246g00006 393 MobiDBLite consensus disorder prediction 94 121 - -
Stsc151246g00006 393 PANTHER BNAANNG10740D PROTEIN-RELATED 52 387 IPR007592 GO:0006355
Stsc151246g00006 393 MobiDBLite consensus disorder prediction 259 275 - -
Stsc151246g00006 393 MobiDBLite consensus disorder prediction 20 50 - -
Stsc151246g00006 393 Coils Coil 202 229 - -
Stsc151246g00006 393 MobiDBLite consensus disorder prediction 122 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151246g00006 Stsc-Chr151246 64282 70339 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151246g00006 87 393 GeBP Transcription Factor Family AT1G11510 30.868 7.02e-26 104
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Stsc151246g00006 DUF573 1.7e-29 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151246g00006 - - adu:107494693 365.54