Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151246g00004 ATGGTGGTTCCTTCTTCTTCATACCCTTTTCAGATTATGCTGCTTCTCTGTCTCACAATTTTGTTGCAGATAGCATCTCATCATCAGGTTGAAGCTGGTGGTTCAAAAGTTGAATACCTTCCAGGTTTTGATGGTCCACTTCCCTTTCATCTTGAAACTGGATATGTGGGTTTGGGGGACACAAATGATGACTTGCAAGTTTTTTATTATTTTATTAAGTCAGAAAATGATCCTGTGACTGATCCTCTTATGCTATGGCTAACTGGTGGTCCTGGTTGTTCTTCATTCTCTGCTCTTGCCTTTCAAATTGGTCCAGTAAAATTTAAAATTGAGGAATACAATGGAAGCTTACCTAATTTGATCTTGAGGTCACAGTCATGGACAAAGGTAACTAGCATTATTTTTGCTGATTTGCCATTTGGAACAGGCTTCTCTTATGCCAAAAATGTCACAGCTCATCGCAGTCATTGGAAATTAATTCACCATACCCATCAATTTATTAGGAAGTGGCTTATGAATCACCCGGAATTTATTTCAAATAAATTTTACATGGGAGCTGATTCATACTCTGGTATTCCTGCCCCTGGTATTGTTCAAGAAATTTCAAATGGAAACGATCTAGGTCTTCCACCCCAGATAAATCTTCAGGGATATATATTGGGAAACCCGGTTACAACAAGTAAAGAGTCAAATGATAAGATCCCATATGCTCATGGAATGGGACTTATTTCTGATGAACTCTATTTGTCACTACAGAGAAATTGTAAAGGGGAGTATATGGATATAAACTCCAAAAATGAAGTGTGTTTAAGAGACATGCAATATTTTCATGAGTGCCTTTTGGGAGTTAATGAGTGGTACATTTTGGATGGTGATTGCAAAATTGGTTTTGTTATGGGTGATCAAGGGACACACAGGAGAATTTTGACTCAGAAGTTGGAGGGTCCTCTTGGTTCTTATCTAAGTGTGCCAACAACAGCAACCTGCCAAGTTGTTTATTGTTATTTCCTTGGCAACCAATGGGCCAATGCTGAAAGTGTTCGCAAGGCACTTCATGTTAGAGAGGGCATAGGAAAATGGAAACGGTGTTACACTACTAATTTTGACTTTGACATAGCTACCAGTTTCCAATTTCATGTAAATCTCAGTGCAAAAGGCTACCGTTCCTTGATATTCAGCGGCGATCACGACTTAGTGGTTCCTTTCTTGTCGACTCAAGCATGGATAAGGGCTTTAAACTACTCCATTCTGGATGATTGGAGGCCATGGCTCCTCAATGGCCAAGTTGCAGGATATACGAGGACTTACTCAAATCAAATGACATTTGCAACCATAAAGGGTGCAGGGCATACAGCTACTGAGTACAAGCCAGATGAAGGTTTAGCCATGTTCTCTAGGTGGCTCTCTAATGTCCCTTTATGA 1422 0.3987 MVVPSSSYPFQIMLLLCLTILLQIASHHQVEAGGSKVEYLPGFDGPLPFHLETGYVGLGDTNDDLQVFYYFIKSENDPVTDPLMLWLTGGPGCSSFSALAFQIGPVKFKIEEYNGSLPNLILRSQSWTKVTSIIFADLPFGTGFSYAKNVTAHRSHWKLIHHTHQFIRKWLMNHPEFISNKFYMGADSYSGIPAPGIVQEISNGNDLGLPPQINLQGYILGNPVTTSKESNDKIPYAHGMGLISDELYLSLQRNCKGEYMDINSKNEVCLRDMQYFHECLLGVNEWYILDGDCKIGFVMGDQGTHRRILTQKLEGPLGSYLSVPTTATCQVVYCYFLGNQWANAESVRKALHVREGIGKWKRCYTTNFDFDIATSFQFHVNLSAKGYRSLIFSGDHDLVVPFLSTQAWIRALNYSILDDWRPWLLNGQVAGYTRTYSNQMTFATIKGAGHTATEYKPDEGLAMFSRWLSNVPL 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151246g00004 473 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 36 457 IPR001563 GO:0004185|GO:0006508
Stsc151246g00004 473 Gene3D - 334 473 - -
Stsc151246g00004 473 SUPERFAMILY alpha/beta-Hydrolases 37 472 IPR029058 -
Stsc151246g00004 473 FunFam Serine carboxypeptidase-like 11 31 473 - -
Stsc151246g00004 473 FunFam Carboxypeptidase 328 472 - -
Stsc151246g00004 473 PRINTS Carboxypeptidase C serine protease (S10) family signature 440 453 IPR001563 GO:0004185|GO:0006508
Stsc151246g00004 473 PRINTS Carboxypeptidase C serine protease (S10) family signature 136 146 IPR001563 GO:0004185|GO:0006508
Stsc151246g00004 473 PRINTS Carboxypeptidase C serine protease (S10) family signature 123 135 IPR001563 GO:0004185|GO:0006508
Stsc151246g00004 473 PRINTS Carboxypeptidase C serine protease (S10) family signature 170 195 IPR001563 GO:0004185|GO:0006508
Stsc151246g00004 473 Gene3D alpha/beta hydrolase 31 297 IPR029058 -
Stsc151246g00004 473 Pfam Serine carboxypeptidase 41 470 IPR001563 GO:0004185|GO:0006508
Stsc151246g00004 473 FunFam Carboxypeptidase 376 470 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151246g00004 Stsc-Chr151246 47664 54665 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151246g00004 28 64 Calmodulin-binding Proteins AT2G22960 56.410 1.22e-06 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151246g00004 K16296 - gmx:100780069 703.745