Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151245g00009 ATGGTTCTCCAAAAATCATCTTCATCACCATCTATAGTGTTTCAAGTGAGGAGGAATCCAGCAGAGATAGTGGCACCTGCTGGGCCCACTCCCCATGAGCTTAAGCTTCTCTCCGACATTGATGACCAACAAGGTCTACGCATCTACCATTCAGCGGTTCAGTTCTTTCCTTATCAGGCTTCAATGGCAGGGAAAGACCCTGTCCATGTCATTAGGGAAGCATTGTCCAAAGCACTTGTGTTCTACTATCCATTAGCTGGGAGGCTTAGGGAAGGTCCTACTGGCAAACTTATGGTGGATTGCACTGCCCAAGGTGTATTGTTCATTGAAGCTGATGCAGATGTTACACTTGATCAGTTTGGTGTTGATCTTTTGCCACCATTCCCTTGCTTTCATGAGCTCCTCTACCATGCTGCATTTCCTAATAATGGAATTATTAATTCTCCACTCCTGCTTATTCAGGTGACGCGGCTCAAATGCGGGGGCTTTATATTTGCTATGCGTGTGAACCACACGATGTGTGACGGATGTGGAACTACTCAATTCATAAAGGCAATTGCAGAAATAGCCCAAGGTGCAGCAAAGCCTTCCATCATGCCAGTGTGGTTGAATCCTCCGCTACCTGAAGGGTATTATGGCAACGCATTTGTGCTTCCTGCGGCAGTTTCCACTGTGGGGATGCTATGCGGGCGGCCCTTGAGCTACGCCTTGGAGTTGGCGAAGAAACCAAAGAAAGAAGCTACCGAGGAGTATGTGCACTCTACTGCCGATCTAATGGCCACGAAGGGAAGGCCTCCTTTTTCTTTGAGAAGATCGTTTATAGTTTCAAACCTTTCAAAACTTGAGTTAAGTGATGTGGATTATGGATGGGGTAAGCCTTTGTATTTTGGACCAGAAGAGGCTGGTATACATGATATTCCTGGTCTGTGCTACTATCTTCCATATACTAACTCTAAAGGAGAGCATGGTACAGTTGTTTTGATTTGCCTCCCTGAAGACGCCATGAAAAGGTTTGAAAACGAGATTAATGGAATACTTCACATCAAGGGTGAAGATAAACCTATCAACTCAATTATGTCCAATCTGTAA 1089 0.4518 MVLQKSSSSPSIVFQVRRNPAEIVAPAGPTPHELKLLSDIDDQQGLRIYHSAVQFFPYQASMAGKDPVHVIREALSKALVFYYPLAGRLREGPTGKLMVDCTAQGVLFIEADADVTLDQFGVDLLPPFPCFHELLYHAAFPNNGIINSPLLLIQVTRLKCGGFIFAMRVNHTMCDGCGTTQFIKAIAEIAQGAAKPSIMPVWLNPPLPEGYYGNAFVLPAAVSTVGMLCGRPLSYALELAKKPKKEATEEYVHSTADLMATKGRPPFSLRRSFIVSNLSKLELSDVDYGWGKPLYFGPEEAGIHDIPGLCYYLPYTNSKGEHGTVVLICLPEDAMKRFENEINGILHIKGEDKPINSIMSNL 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151245g00009 362 Gene3D - 12 205 IPR023213 -
Stsc151245g00009 362 Gene3D - 206 342 IPR023213 -
Stsc151245g00009 362 PANTHER ACYL TRANSFERASE 4 204 343 - -
Stsc151245g00009 362 Pfam Transferase family 20 202 - -
Stsc151245g00009 362 Pfam Transferase family 203 342 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151245g00009 Stsc-Chr151245 54681 56788 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151245g00009 203 340 Monolignol Biosynthesis Gene Families AT5G48930 27.586 1.28e-08 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151245g00009 K19861 - aip:107641488 311.997