Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151245g00006 ATGGTTCTCCTAAAATCATCTTCATCACCATCTATAGTGTTCAAAGTGAGGAGGAATCCAGCAGAGCTAGTGGCACCTGCTGGGCCCACACCCCATGAGCTTAAGCTTCTCTCCGACATTGATGACCAACAAACTCTCCGCATCTTCTACTTTCCAGCGGTTCAGTTCTTTCCTTGTCAGCCGTCCATGGCAGGGAAAGACCCTGTCCATGTCATTAGGGAAGCATTGTCCAAAGCACTTGTGTTCTACTATCCATTAGCTGGGAGGCTTAGGGAAGGTCCTACTGGCAAACTTATGGTGGATTGCACTGCCCAAGGTGTATTGTTCATTGAAGCTGATGCAGATGTTACACTTGATCAGTTTGGTGTTGATCTCCTGCCTCCATTCCCTTGCTCTCATGAGCTCCTCTACGATGCTCCATTATTTTCTAATGATGGAATTATTAATTCTCCACTCATGCTTATTCAGGTGACACGGCTCAAATGTGGTGGCTTTATCTTTGCTATGCGTGTGAACCACACAATGTGTGATGCAAGTGGAATTTTTCTATTCATAAAGGGCATTGCAGAAATAGCCCAAGGTGCGGCAAAGCCTTCCATCATGCCAGTGTGGTGTAGGGACCTTCTTTGTGCCAGGGACCCACCAACAGTCACATGCCTCCACCCTGAGTACCAACAACAAGCGCTTCATGACTACGAAAGTCCCTCCTTCAAATGCTGCCATGCTTCCTTCTTCTTTGGCCCCAAACACATCCATGCATTGCGCCACCTCCTCCCCGATGACCTTGCTCAATCTTCCTCCACCTTCGATGTCCTCACTGCATTCCTCTGGCGTTCTCATACAGCTGCTCTCCATTGGCAAAACCCTAATCAAGAGGTTCTCTTGATGTGCACAGTCAATGCACGTTTTGAACCTTGCAGGTTGAATCCTCCACTACCTGAAGGGTATTATGGCAACGCTTTAGTGTTTCCTGCGGTAGTTTCCACTGTGGGGATGCTATGCGGGCAACCCTTGAGCTACGCGTTGGAGTTGTCGAAGAAACCAAAGAAAGATGCTACTGAGGAGTATGTGCACTCGACTGCCGATCTAATGGCCACGAAGGGAAGGCCTGCCCTTTCGTTGAGAAGATCATTTATAGTTTCAAACCTTTCAAAATTTGAGTTAAGTGATGTGGATTATGGATGGGGTAAGCCTTTGTATTTTGGACCATACAAGGCTGGTATAGATGATATTCCTGGTGTGAGCTACTATCTTCCATATACTAACTCTAAAGGAGAGCATGGTACAGTGGTTTTGATTTGCCTCCCTGAAGACGCCATGAAAAGGTTTGAAAACGAGATTAATGGAATACTTCACATCAAGGTTGAAGATAAACCTATCAGCTCAATTATGTCCAATCTGTAA 1404 0.4623 MVLLKSSSSPSIVFKVRRNPAELVAPAGPTPHELKLLSDIDDQQTLRIFYFPAVQFFPCQPSMAGKDPVHVIREALSKALVFYYPLAGRLREGPTGKLMVDCTAQGVLFIEADADVTLDQFGVDLLPPFPCSHELLYDAPLFSNDGIINSPLMLIQVTRLKCGGFIFAMRVNHTMCDASGIFLFIKGIAEIAQGAAKPSIMPVWCRDLLCARDPPTVTCLHPEYQQQALHDYESPSFKCCHASFFFGPKHIHALRHLLPDDLAQSSSTFDVLTAFLWRSHTAALHWQNPNQEVLLMCTVNARFEPCRLNPPLPEGYYGNALVFPAVVSTVGMLCGQPLSYALELSKKPKKDATEEYVHSTADLMATKGRPALSLRRSFIVSNLSKFELSDVDYGWGKPLYFGPYKAGIDDIPGVSYYLPYTNSKGEHGTVVLICLPEDAMKRFENEINGILHIKVEDKPISSIMSNL 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151245g00006 467 Gene3D - 224 447 IPR023213 -
Stsc151245g00006 467 Pfam Transferase family 16 447 - -
Stsc151245g00006 467 PANTHER ACYL TRANSFERASE 4 14 449 - -
Stsc151245g00006 467 Gene3D - 14 223 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151245g00006 Stsc-Chr151245 43460 45739 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151245g00006 15 445 Monolignol Biosynthesis Gene Families AT5G48930 30.290 3.67e-43 156
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151245g00006 K19861 K13610 gmx:100795237 584.719