Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151243g00009 ATGCCATCACACCACCAGTCCACGTTAGCACCCACGAACACGAACACGAACAAACCCCAAAACCATCTCTTCTCCTCCGCCTCCTCTTTCTTCCTCCTCCTCTTCTTCTGCGTTCGAAACCCAACAAGGAAGAACCACCGAACAACGCCATCTTCTGACTCCGACTCCAACCCTCCACACCGCTTCTCCTACTCTCTCCTCCGCCGCGCAACCAACTCCTTCTCCACCACCCTCGGCCACGGAGGCTTCGGCCCTGTCTTCTCCGCTTCCCTCGCCGGAAAACCCCTCGCCGTCAAGCTCATGGACTCCTCTGCATCTCTCCAAGGGGAGCGCGAGTTCCACAACGAGCTCCTCTTCGCCTCCAGGCTTCTCCGTTCGAACTCTTCTTCCGCTTGCCGTCACGTGGTCCCTGCCATAGGTTTCGCCTCCGATCCCAAACGGCGCCGTTTCCTCATCGTCTACGATCTCATGCACAACGGCAACCTCCACGACGCTCTCCTCCGCCGAAAATCCCCTGAGCTCATGCGATGGCAGACGAGATTCTCCGTCGCTCTTGATGTCGCGAGAGGGATACAGTTTCTTCACTCGTGCAACCCTCCGGTGATCCACGGCGATATCAAGCCCAGTAATATTCTCTTGGACCGGTCCTTTGCGGCCAAGATCGGAGACTTTGGGCTTGCGAGGTTCAAGACGGAGAACAAGTTGGAAGGTGAGGTTTTGGGGTGCGAGAGTGATGGTGCCTCTGTTTTTGAGGAGCAATCTCCGGAAGGACCGATATCATCGCCTCCTGATGCGGTTGGGAAGAAAAATGGGAAGGGTGTGGAGGGCAATTTGGTAAATCAAGAAAATGGAGGTTTATCGGGTGTTATGGTGAAGGATTATGTGATGGATTGGATTGGGAATGATGTTGGAATGCAGAGACCCAAAGGTGTGTGGATTTCTTCTGCTTCTGCTGCTTCTACCAGTGGAAAGGAAGACACCACCAACAACAAGAAGAAGAAAAACAAGAGTAATAGTATTAGTAGTAGTAGTAGGAGGAGGAAACTGGAATGGTGGGAATCTATGGATGATGAGGATGGTGATGTTTTGAAGAAGGAGAAAAGAAGGCCTGTCAGGGAATGGTGGAAGGAGGAGTATTCTCAAGAGCTCGCTAGCAAGAAGAAGAAAAAGAAAAAGAAGAAAGAAAAGAGTAGAAAAGGTGCAGAGAGCGATGATAATGTTGATGATTGGTGGTTCAGAGATGGTGATGCCAAGAAGATCAAGAAAAGCGGTAGCAGGAACAGCGTGGATTCATGGCTAGACGATGGTGAAATCCCCAAGAGTGGCGCTATGAGCAGCAATCAAAGCATGAGAGGGACAGTGTTCTATGTTGCTCCAGAGTATGGTGGAGATGCGTCGGAGAAGTCCGATGTCTACAGTTTTGGGGTGTTATTGCTTGTAATAGTGTCTGGGAGGCGTCCATTAGAGGTGACTACTGGTTCGCCATTGTCGAGCAGTGAGTTTCAGAGAGCGAATCTTGTGTCGTGGGCCCGCCATTGCGGCCGGAAAGGGAAGCTTCTTGATCTTGTTGATGAATCCATTCAAGGTTTGGATAAAGAGCAGGCTCTGCTGTGTATCAAGGTTGCGTTGCTCTGTTTGCTAAAGACACCATCTCGCCGTCCTTCAGTGAAAGAGGTTGTAGGGATGCTTAGTGGGGAATTGGAGCCACCACAATTGCCCCTTCACTATTCATCTCCATCATCCACTCAACAGTAA 1755 0.5094 MPSHHQSTLAPTNTNTNKPQNHLFSSASSFFLLLFFCVRNPTRKNHRTTPSSDSDSNPPHRFSYSLLRRATNSFSTTLGHGGFGPVFSASLAGKPLAVKLMDSSASLQGEREFHNELLFASRLLRSNSSSACRHVVPAIGFASDPKRRRFLIVYDLMHNGNLHDALLRRKSPELMRWQTRFSVALDVARGIQFLHSCNPPVIHGDIKPSNILLDRSFAAKIGDFGLARFKTENKLEGEVLGCESDGASVFEEQSPEGPISSPPDAVGKKNGKGVEGNLVNQENGGLSGVMVKDYVMDWIGNDVGMQRPKGVWISSASAASTSGKEDTTNNKKKKNKSNSISSSSRRRKLEWWESMDDEDGDVLKKEKRRPVREWWKEEYSQELASKKKKKKKKKEKSRKGAESDDNVDDWWFRDGDAKKIKKSGSRNSVDSWLDDGEIPKSGAMSSNQSMRGTVFYVAPEYGGDASEKSDVYSFGVLLLVIVSGRRPLEVTTGSPLSSSEFQRANLVSWARHCGRKGKLLDLVDESIQGLDKEQALLCIKVALLCLLKTPSRRPSVKEVVGMLSGELEPPQLPLHYSSPSSTQQ 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151243g00009 584 MobiDBLite consensus disorder prediction 1 20 - -
Stsc151243g00009 584 Pfam Protein tyrosine and serine/threonine kinase 74 233 IPR001245 GO:0004672|GO:0006468
Stsc151243g00009 584 MobiDBLite consensus disorder prediction 249 282 - -
Stsc151243g00009 584 MobiDBLite consensus disorder prediction 316 347 - -
Stsc151243g00009 584 MobiDBLite consensus disorder prediction 385 405 - -
Stsc151243g00009 584 ProSitePatterns Serine/Threonine protein kinases active-site signature. 201 213 IPR008271 GO:0004672|GO:0006468
Stsc151243g00009 584 ProSiteProfiles Protein kinase domain profile. 72 572 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151243g00009 584 PANTHER OS07G0586332 PROTEIN 280 580 IPR044576 -
Stsc151243g00009 584 SMART serkin_6 72 563 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151243g00009 584 Gene3D Transferase(Phosphotransferase) domain 1 63 248 - -
Stsc151243g00009 584 Coils Coil 376 396 - -
Stsc151243g00009 584 SUPERFAMILY Protein kinase-like (PK-like) 56 578 IPR011009 -
Stsc151243g00009 584 Gene3D Transferase(Phosphotransferase) domain 1 417 570 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151243g00009 Stsc-Chr151243 39890 42109 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151243g00009 440 560 Receptor kinase-like Gene Family AT3G58690 33.071 2.40e-10 60.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XI Stsc151243g00009 PK_Tyr_Ser-Thr 1.5e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151243g00009 - - aprc:113872924 600.127