Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc151243g00007 | ATGTATCCTTTACAGCAGGAGAGCAATGAAGTGGTGATCCAATTCTGTTCTAACAATGTCGACCAGCAACCACACAAAGATCTGATTCTCCATCATTGTGATTCTTCGCTTCTTCATAAAAAATTAGTCATCCCCCCAAGGAAGAAAATATTTTCTGGCAATAACAAGAATGACAGCAGAAGCAATAAGGTGGCCCATAGAGACATCGAAAGGCAAAGGAGGAAACAAATGGCTACCCTTCATGCTTCCCTTAGATCCCTTCTCCCTCTTCAATTCATCAAGGGAAAGCGTTCGATATCAGATCAAATAAAGGAGGCAGTGAATTACATAAAGCAGCTTCAGAATAACTTGAAGGAACTCACTGCCAAGAGGGATAAACTCAAAAAACTCTCTTCATCATCAATAATAACAACTAATTCCCTGGCCCCTGAAAACCCTCATTACAAAAACCATGTTGCTGCAGCTTCTTCTACAAGTTTCTCGGTCCAGTTGAATGATATTGGAACTGATGATGAGGGAATGATTGAAATCACCTGTTGTTGTAATTATTCATACAGTAGAGATCAGCGAGAGGAACAAGTGGTTCCACTTTCAAAGTTGCTGAAATTAGTTCTTCAAGAGGGGCTCCATGTTGTTACTTCCCTTTCAACTCAACTCAATAATGCAACACTCATCCACACTCTCCACTGTCAGGTTAAATCCAACAACAGTGTGGATCTGTCTGAGCTGAGAAGCAAATTGGTCAATGAAATTTCATCATCATTTAGGTGCTATCTCTAA | 780 | 0.4013 | MYPLQQESNEVVIQFCSNNVDQQPHKDLILHHCDSSLLHKKLVIPPRKKIFSGNNKNDSRSNKVAHRDIERQRRKQMATLHASLRSLLPLQFIKGKRSISDQIKEAVNYIKQLQNNLKELTAKRDKLKKLSSSSIITTNSLAPENPHYKNHVAAASSTSFSVQLNDIGTDDEGMIEITCCCNYSYSRDQREEQVVPLSKLLKLVLQEGLHVVTSLSTQLNNATLIHTLHCQVKSNNSVDLSELRSKLVNEISSSFRCYL | 259 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc151243g00007 | 259 | Coils | Coil | 96 | 130 | - | - | |
Stsc151243g00007 | 259 | SMART | finulus | 67 | 119 | IPR011598 | GO:0046983 | |
Stsc151243g00007 | 259 | FunFam | Transcription factor bHLH126 | 53 | 141 | - | - | |
Stsc151243g00007 | 259 | Gene3D | - | 51 | 140 | IPR036638 | GO:0046983 | |
Stsc151243g00007 | 259 | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 61 | 113 | IPR011598 | GO:0046983 | |
Stsc151243g00007 | 259 | Pfam | Helix-loop-helix DNA-binding domain | 63 | 114 | IPR011598 | GO:0046983 | |
Stsc151243g00007 | 259 | CDD | bHLH_AtORG2_like | 63 | 130 | - | - | |
Stsc151243g00007 | 259 | PANTHER | ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED | 55 | 248 | - | - | |
Stsc151243g00007 | 259 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 59 | 129 | IPR036638 | GO:0046983 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc151243g00007 | Stsc-Chr151243 | 30981 | 32260 | Dispersed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc151243g00007 | 66 | 251 | Basic Helix-Loop-Helix Transcription Factor Gene Family | AT4G25410 | 36.559 | 1.28e-33 | 119 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | bHLH | Stsc151243g00007 | HLH | 6.2e-10 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc151243g00007 | - | - | gmx:100775836 | 170.629 |