Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151238g00001 ATGATGGACTCGTGTTTAAACAAGAAACTATTCCCCCTCCTCTCTCTTATCTTAATCCTACTTCTCTCAGGACAAAGGGAAAGGGTGCAAGCAGAGGGTGTCCAAGCCAGTGAACCCCCCACTTTGAAACTGTTCGTTTTTGGAGACTCATATGCTGACACCGGTAACATCAGAAAAAGTCTGTCCAATTCATGGAAAGACCCCTACGGCATCACCTTTCCCGGCAAGCCCGCCGGTCGATTCTCCGATGGAAGGGTCCTCACCGACTACATTGCTAAGTATCTGGGAGTGAAAACACCAGTCCCATACAGAGTGAGGAAGCTGATGCCGAAGCAGGTAAAATACGGCATGAACTTTGCAGTGGGTGGAACCGGCGTATTTGACACATCTACTCCAGGCCCTAACATGACCACACAGATCCAATTGTTCCAGCAACTCATCCAAGACGGAATCTACACCGCTTCTGATCTCAACAACTCCGTCGCTCTTGTCTCTGTTGCTGGTAACGACTATAGTCACTACCTCGCCACTCACGCCTCTCCTCAGGGACTACCACTTTTCGTGGCGTCCGTGGTGAATCAAACAACAACGAATCTGATGCGAATCAAAGGATTGGGAGTAAAGAAGGTGATAGTCGGCGGCCTCCAACCCCTTGGATGCCTCCCTCAGGTCACAGCCTTATCATCCTTCCAACAATGCAACGCCTCCTCCAACACCTTGGTGGCACTCCACAACAACCTCTTGAACCAAGCAGTTACCAAACTAAACCAATCGTGGTCCTCCTCCTTCGCGGTTCTCGACCTCTACAACAGCTTCATGTCGGTTCTAAACCACCCTACGACGCACAACATCCAGAACCAGTTGCGGCCGTGCTGCGTGGGCGTAAACAGCAAGTATTCGTGTGGGAGTGTGGATGAGAACAAGGTGAAGATGTATAGGGTTTGTGATGATCCCAAATCAGCCTTCTTTTGGGATCTGGTGCACCCAACACAGGCAGGGTGGCATGCCGTGTATAACAAGTTAAGAACCATGAATGCTCTTGAAGCAATTCAGTTCTAG 1059 0.4995 MMDSCLNKKLFPLLSLILILLLSGQRERVQAEGVQASEPPTLKLFVFGDSYADTGNIRKSLSNSWKDPYGITFPGKPAGRFSDGRVLTDYIAKYLGVKTPVPYRVRKLMPKQVKYGMNFAVGGTGVFDTSTPGPNMTTQIQLFQQLIQDGIYTASDLNNSVALVSVAGNDYSHYLATHASPQGLPLFVASVVNQTTTNLMRIKGLGVKKVIVGGLQPLGCLPQVTALSSFQQCNASSNTLVALHNNLLNQAVTKLNQSWSSSFAVLDLYNSFMSVLNHPTTHNIQNQLRPCCVGVNSKYSCGSVDENKVKMYRVCDDPKSAFFWDLVHPTQAGWHAVYNKLRTMNALEAIQF 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151238g00001 352 Pfam GDSL-like Lipase/Acylhydrolase 44 340 IPR001087 GO:0016788
Stsc151238g00001 352 SUPERFAMILY SGNH hydrolase 41 341 - -
Stsc151238g00001 352 Gene3D SGNH hydrolase 32 349 IPR036514 -
Stsc151238g00001 352 PANTHER OSJNBB0059K02.9 PROTEIN 20 343 - -
Stsc151238g00001 352 CDD SGNH_plant_lipase_like 44 341 IPR035669 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151238g00001 Stsc-Chr151238 13591 17372 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151238g00001 9 337 Pollen Coat Proteome AT1G75930 26.989 6.19e-30 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151238g00001 - - gmx:100788092 492.656