Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151231g00011 ATGGCGTCTTCAAGTGGAACATCTTCAGGGTCATCGACTCTTGTGCTTCAGAACTCTGGTTCTGAGGAGGAATTGCAGGCTTTGATGGATCAGAGGAAGAGGAAGAGGATGATATCGAACAGAGAATCAGCGAGGAGATCAAGAATGAGGAAGCAGAAGCACCTTGATGATCTTGTTTCTCAGGTGGGTCAGTTAAGGAAGGAGAATCAACAGATCCTCACAAGTGTAAACATCACCACTCAGCAATATCTGAGTGTTGAGTCTGAGAATTCTGTTCTTAGGGCTCAGGTTGAGGAACTTAGTCACAGGTTGGACTCACTCAACGAGATCATTGACTTCTTGAATGCCAATAACACTTCTGCTACCAATGGTGTTTATGGTGGTGCTAGTGCTTCTTTGGGGCCATTCATGGAGCCACCAGCTGATAGCTTCTTCAACAACTCTTTGAACATGGCGTTTCTTAACCAACCCATTATGGCCTCTGCTTCTGATATGTTGCAATACTGA 507 0.4497 MASSSGTSSGSSTLVLQNSGSEEELQALMDQRKRKRMISNRESARRSRMRKQKHLDDLVSQVGQLRKENQQILTSVNITTQQYLSVESENSVLRAQVEELSHRLDSLNEIIDFLNANNTSATNGVYGGASASLGPFMEPPADSFFNNSLNMAFLNQPIMASASDMLQY 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151231g00011 168 SUPERFAMILY Leucine zipper domain 32 84 IPR046347 GO:0003700|GO:0006355
Stsc151231g00011 168 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 35 50 IPR004827 GO:0003700|GO:0006355
Stsc151231g00011 168 CDD bZIP_plant_GBF1 33 83 IPR045314 GO:0003700|GO:0006355
Stsc151231g00011 168 MobiDBLite consensus disorder prediction 1 51 - -
Stsc151231g00011 168 Pfam bZIP transcription factor 32 89 IPR004827 GO:0003700|GO:0006355
Stsc151231g00011 168 Gene3D - 30 85 - -
Stsc151231g00011 168 PANTHER BZIP TRANSCRIPTION FACTOR 44 4 164 - -
Stsc151231g00011 168 Coils Coil 90 117 - -
Stsc151231g00011 168 SMART brlzneu 28 92 IPR004827 GO:0003700|GO:0006355
Stsc151231g00011 168 FunFam BZIP transcription factor 30 82 - -
Stsc151231g00011 168 MobiDBLite consensus disorder prediction 1 25 - -
Stsc151231g00011 168 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 30 93 IPR004827 GO:0003700|GO:0006355
Stsc151231g00011 168 MobiDBLite consensus disorder prediction 26 51 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151231g00011 Stsc-Chr151231 47323 47829 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151231g00011 26 168 bZIP Transcription Factor Family AT4G34590 59.722 9.40e-52 161
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Stsc151231g00011 bZIP_1 2.1e-10 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151231g00011 K25786 - rcu:8285748 228.024