Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151229g00011 ATGAACGGCGCAGGGCCCACAGCAACAGCCACAGCCACAGCCACAGCCACCGCCACCTTCAGGAACATCCTCGACAAGCCCCTTCACCAGCTCACCGAAGATGACATTTCCCAGCTCACCCGCGAAGACTGTCGCAGATTCCTCAAGGAAAAAGGGATGCGCAGGCCTTCGTGGAACAAATCGCAGGCAATTCAGCAGGTCATTTCCCTCAAGGCGCTGCTTGAGCCCCCCAACGACGACGCCCCCGCCGTCGTTCCCACCCACCATTCAACCTCTCCACCTCAGCCTCAGCCTCAGCCTCAAGGGAATTTGAACGATGCTCCTCCCGCTGAAGAGCCAGCTCCTCAAGCTGCTGATGATATTCAGAAATCTGCGTCGTCTCCGGAGAAACCCACTGAAACCAATGACAACAATGCTGTGAGCCCCAGAGCATGTGCAACTAGCGGAGTTGGGCAAATGACAATATTCTACTGTGGTAAGGTGAATGTCTATGATGGAGTCCCACCTGATAAGGCACAAGCTATCATGCACCTTGCAGCAAGTCCAGTCCAATTTGCTCAGGATGATCCTGTAAACAGAAATACAGCAGTTTGGACTTCTCCTTGTCACATACCGTTGAATAAGGATGCCCTAGTTCCTGTTGATACAACAATGGTGCAGGTTGCTCAAGCAGATAAGATGATGGAATATCCTCTGCATTACAGGGAGAAAGGAAGCATAGCTCGCGATGCTGATGGTCAAGCAAGCAGAAAAGAGTCATTGCAACGATATCGTGAAAAGCGAAAAGACAGGGGAAGACTGAAGGGCAAGAAATTGCCTGGGGTAACTCCATCTAACTTGGAGATGTATTTGAACCTTCCAGCAAAAATCCAGACCTCAAATGGCAACTCAAGCCGAAGTAGCACATGCTCTCCGCCACAGCCTAGACTGCCTCTGTCTTTCAGTGGCTCAGCTGACAACCAGCTAAAAGTTGCACTTCCCATTGATCTCAATGACAAAGATGTTCAAGAATGCTAA 1017 0.5054 MNGAGPTATATATATATATFRNILDKPLHQLTEDDISQLTREDCRRFLKEKGMRRPSWNKSQAIQQVISLKALLEPPNDDAPAVVPTHHSTSPPQPQPQPQGNLNDAPPAEEPAPQAADDIQKSASSPEKPTETNDNNAVSPRACATSGVGQMTIFYCGKVNVYDGVPPDKAQAIMHLAASPVQFAQDDPVNRNTAVWTSPCHIPLNKDALVPVDTTMVQVAQADKMMEYPLHYREKGSIARDADGQASRKESLQRYREKRKDRGRLKGKKLPGVTPSNLEMYLNLPAKIQTSNGNSSRSSTCSPPQPRLPLSFSGSADNQLKVALPIDLNDKDVQEC 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151229g00011 338 SMART tify_2 146 181 IPR010399 -
Stsc151229g00011 338 Pfam Jas motif 247 264 IPR018467 -
Stsc151229g00011 338 ProSiteProfiles Tify domain profile. 146 181 IPR010399 -
Stsc151229g00011 338 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 24 276 IPR040390 -
Stsc151229g00011 338 MobiDBLite consensus disorder prediction 89 103 - -
Stsc151229g00011 338 Pfam tify domain 151 180 IPR010399 -
Stsc151229g00011 338 MobiDBLite consensus disorder prediction 241 278 - -
Stsc151229g00011 338 MobiDBLite consensus disorder prediction 291 316 - -
Stsc151229g00011 338 MobiDBLite consensus disorder prediction 241 260 - -
Stsc151229g00011 338 MobiDBLite consensus disorder prediction 76 144 - -
Stsc151229g00011 338 MobiDBLite consensus disorder prediction 120 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151229g00011 Stsc-Chr151229 57001 61583 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151229g00011 15 307 Tify Gene Family AT4G14720 43.671 2.82e-68 215
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Stsc151229g00011 tify 4.6e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151229g00011 - - adu:107467071 453.751