Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151224g00011 ATGGCGGTGGGAATAGATCTTGGCACAACATATTCTTGTGTTGCAGTGTGGCATGAACAGCACAACAGACTTGAGATCATTCAAAACGATCGAGGCAACAAAAAAACACCTTATGTTGCTTTCACTGACAAACAAAGGTTGATCGGTGAAGATGCTAAGAACCAGCTGGCTGCAATGAATCCTACCAACACTGTCTTCGATGCTAAGAGGATGATTGGCAGAAAATATAGTGATCCCTATATTCAGAAACACAAACTTTTGAGGCCATTCAAAGTCATTTCCGGTGTTGATGATCAACCAACAATTGTTGTTCAGCACAAGGGTCAAGAGAGGCGACTCTGTGCTGAGTAA 351 0.4245 MAVGIDLGTTYSCVAVWHEQHNRLEIIQNDRGNKKTPYVAFTDKQRLIGEDAKNQLAAMNPTNTVFDAKRMIGRKYSDPYIQKHKLLRPFKVISGVDDQPTIVVQHKGQERRLCAE 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151224g00011 116 PRINTS 70kDa heat shock protein signature 52 60 - -
Stsc151224g00011 116 PRINTS 70kDa heat shock protein signature 1 14 - -
Stsc151224g00011 116 PRINTS 70kDa heat shock protein signature 31 43 - -
Stsc151224g00011 116 PANTHER HEAT SHOCK PROTEIN 70KDA 2 107 IPR013126 GO:0005524|GO:0140662
Stsc151224g00011 116 SUPERFAMILY Actin-like ATPase domain 1 112 IPR043129 -
Stsc151224g00011 116 Gene3D - 1 116 - -
Stsc151224g00011 116 Pfam Hsp70 protein 2 109 IPR013126 GO:0005524|GO:0140662
Stsc151224g00011 116 ProSitePatterns Heat shock hsp70 proteins family signature 1. 5 12 IPR018181 -
Stsc151224g00011 116 FunFam heat shock 70 kDa protein-like 1 103 - -
Stsc151224g00011 116 FunFam Heat shock 70 kDa protein 4 38 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151224g00011 Stsc-Chr151224 69759 70190 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151224g00011 2 116 Calmodulin-binding Proteins AT3G12580 67.241 1.02e-48 162
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151224g00011 K03283 - gmx:102667578 163.31