Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151220g00007 ATGCAAGTCACACATGAAAGGGTTCAAGAAAGGGATCATGACACTACTTCTTCCGATTTTGAACCTATCTCAGAAGATGAAGAAGAAACCATGGAGCAAGATGGAAGAAAAAGGGGCAAGAGGGAGGCAATGATAAAGGCTACAACTATTGATGAGTTTTTAAAGGAAAATGGGATTGATCTGGAAAATGTCTTGGCCAGCTTGGATCTCCCACTTAATGGACCAAGCACTGAACCAAGTTATGATGGGAATGATAGCGCGGCTCTTCATGCAGATTATTATAATCAAGTGATGGCTGACGTTGATGATAAGCAAGGAGAGCCAAAGAAGAACAAAACTCGTGGAAAAACTATATGCGCAAAGATTTATGCCAGACTTATGCATGAGCGAGAGGAAGTCACTTTTGATATGGCACACTTGGTAGAAATAAAAGATTTGTTAGTCTTTCATACACTAATTGGCTGGTTGTACCTCAAGCAGCAAAAGATTTCATGTGGAAATATGTTAACACCAAGTTTATCCTTCCATCGAGTTGCGAAAAATGGACCTCTTCTGGTACCCGGTAGTCAATTCATAAAATTGATCTTGTATTGGAGGCATCCTACAATTCAGGCATTGAGTCAAAAGAACAAGCATCATAAAGCACAACAAAAGTTTCCACATCACATGGGGCCAATCAATTTCAGACGAGTACGAGCGGCCTTGCGCGCTGCAAGTGGAACAAATGAAGAACCAAAAAGGTTTGAAATATTCATTGCTACTCGCAAGAGCCAAAAAAGGAAGGAACTTGATGAGGAAACACAAAGTGTAATTGTAAGAATCAATTTCATTATCAATAATTATATTCCAGCATGTGGGGGGCATCGTTTAACTTTACTTTATATGTTTGTTATAATCAGCAAGACTTCCAAAGTATACAAGCTTCCGGTGAGACATATCAAAGAGCAGCACCAAGACGAAGTCCAATCCTTGAAGGGTGAGCTTGGAGACGTGAAGGAAGAAGTTCATGGATTGCATAATATGGTTAAACTACTTCTTCAACGCTCTGAACTTGGAATGAGTCCAGAAGAAATCGAAGCTATGTTGAAAAATCCGCAACACTCTCCGGTTGATGCAAATAGTTGTCATGGATCAACTCATATTCCGAATATTAATATGGAGCATCGCTTAGAAAGCGATGCCTATTCTCTTGGCCAAAAGCGCACCCGTAGATACAGAAAAGCTGCTCAAAGTGTTGCTTCTATCCCAGTGCTCAAAGTGTTGCTTGTTACTGCAATTGGTTTGTTTCTTGCAGTGGATCAGATCAGTATTCTTGATGAAGATGCAAGAAAGAAAGTCAATCATGATGAACAAGATTCTCTAAGAAGTAGTTCTGGAGAAGAATTTCTTACATGGCAGGATTACAAAGCAATGCCTTTCACTCAATGTGTTATTGATGAAACACTTAGACTTGGGGGAATTGCAATTTGGTTGATGAGAGAAGCAAAAGAAGACATTCAATACCAAGCAGTCCATTTAGATGAGAATGTGTATAATGGAGCTCTAGACTTCAATCCATGGAGATGGATGAAACCTGAAAATGAGAAGACTTTGTTGCAGTTCTGGAATGAACTCCAAGAACATCAACTTCTACTGAGAAGGTATCATGCTTGGTATTCAAGAAATGGTTTACCTAGAGAGGATGCTGCTGAAGATGACGATGGCATTTCTTTTAGTTACAATAATTTGTTGGATAGGTAG 1740 0.3948 MQVTHERVQERDHDTTSSDFEPISEDEEETMEQDGRKRGKREAMIKATTIDEFLKENGIDLENVLASLDLPLNGPSTEPSYDGNDSAALHADYYNQVMADVDDKQGEPKKNKTRGKTICAKIYARLMHEREEVTFDMAHLVEIKDLLVFHTLIGWLYLKQQKISCGNMLTPSLSFHRVAKNGPLLVPGSQFIKLILYWRHPTIQALSQKNKHHKAQQKFPHHMGPINFRRVRAALRAASGTNEEPKRFEIFIATRKSQKRKELDEETQSVIVRINFIINNYIPACGGHRLTLLYMFVIISKTSKVYKLPVRHIKEQHQDEVQSLKGELGDVKEEVHGLHNMVKLLLQRSELGMSPEEIEAMLKNPQHSPVDANSCHGSTHIPNINMEHRLESDAYSLGQKRTRRYRKAAQSVASIPVLKVLLVTAIGLFLAVDQISILDEDARKKVNHDEQDSLRSSSGEEFLTWQDYKAMPFTQCVIDETLRLGGIAIWLMREAKEDIQYQAVHLDENVYNGALDFNPWRWMKPENEKTLLQFWNELQEHQLLLRRYHAWYSRNGLPREDAAEDDDGISFSYNNLLDR 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151220g00007 579 Coils Coil 314 334 - -
Stsc151220g00007 579 Gene3D Cytochrome P450 206 556 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151220g00007 579 PANTHER CYTOCHROME P450 26 425 532 - -
Stsc151220g00007 579 MobiDBLite consensus disorder prediction 1 20 - -
Stsc151220g00007 579 SUPERFAMILY Cytochrome P450 448 528 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151220g00007 579 Pfam Cytochrome P450 450 524 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151220g00007 579 MobiDBLite consensus disorder prediction 1 40 - -
Stsc151220g00007 579 Pfam Plant transposase (Ptta/En/Spm family) 190 275 IPR004252 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151220g00007 Stsc-Chr151220 59540 65361 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151220g00007 463 529 Cytochrome P450 AT1G73340 63.415 2.43e-27 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151220g00007 - - ahf:112786896 304.679