Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151211g00002 ATGGCACAGTGGGGAGTTCGTCATCGATTGCCATTCAGGGGTCGGCATGTGGATGAGGGATATGAAATCCAACTTCCTGACTTTCCTAAGGAAGAGGAATCTATCGATGAAGAAGAAGAGGAAGAAGAAAAAATAATAAATACTGAGTCTTTATTTTTGCCAGAAACTAAGAAGAGGAAGCGAATCAGCCTTAGTCAGCTTAGAGAGGTAAAAGAGGAGCCATGTGGGAGGCAAAGTAGTCGCAAGCTTAAAACAAAGAAGTCTGACAGTAAGGATAGATGGTCAGCTGAGAGGTATAAATTGGCTGAGCAAAGTATGTGGGAGGTTTTAAAGGCTGAAGGTGCAACTTTTGAAAACCCAATAACCCGACCTGCATTAAGAATGGCAGCACGTAAGCACATTGGCGATACTGGACTCTTGGACCACTTACTGAAGCATATTGATGGTAAAGTGGCACCTGGAGGTACTGAGCGCTTCCGAAGATGGTTCAACACTAAAGGAATCATGGAGTATTGGTTGGAAAGTGCTGACTTGGATGATGTTCGCCAGCTGGCTGGGGTGCAGGATCCTTACTGGATCCCACCACTTGCAATTATGGCTGGCAGTGCCCCCTCTCAGAAGACTGATTCATCTGATGAGTTGAAACTACTGAAAATAGAAATGGCCCAACTGAAGAAAGATATGCAGCAGCTCATTGCCAAGCAGCAACCGAAAAGTGAAGTTAGTTTCATGGAGGAGTCTCACAAGGAATTGGTGAAGTGGAGAGCTGGTGTTGATCATCGCCTTACTGAAATCATGGCATCTCTGAAGGGTGTGCAGGGCAAGTACGGGGAATTTGCAACTTGGAAAACTAAAGTTGAGCAACAGTTTGCCGAAATAACAAATAAATTGAGTGATCTCAGAGCATCAAGGGAATGTGTTCCTCCTAGTCCTCCTTCAGAGAGGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGAATTTGCAACTTGGATTGGGAGTTCCGAGCTGCTTAATGTTCCTCCTGAGATTGTACTTGATGACCCCAACACATCCCTCCCAACGCAATTACTTAATGAAGAATTGA 1113 0.425 MAQWGVRHRLPFRGRHVDEGYEIQLPDFPKEEESIDEEEEEEEKIINTESLFLPETKKRKRISLSQLREVKEEPCGRQSSRKLKTKKSDSKDRWSAERYKLAEQSMWEVLKAEGATFENPITRPALRMAARKHIGDTGLLDHLLKHIDGKVAPGGTERFRRWFNTKGIMEYWLESADLDDVRQLAGVQDPYWIPPLAIMAGSAPSQKTDSSDELKLLKIEMAQLKKDMQQLIAKQQPKSEVSFMEESHKELVKWRAGVDHRLTEIMASLKGVQGKYGEFATWKTKVEQQFAEITNKLSDLRASRECVPPSPPSERXXXXXXXXXXXXXXXXXXXXNLQLGLGVPSCLMFLLRLYLMTPTHPSQRNYLMKN 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151211g00002 370 Coils Coil 283 303 - -
Stsc151211g00002 370 Coils Coil 207 234 - -
Stsc151211g00002 370 PANTHER PROTEIN DYAD 1 314 IPR044221 GO:0007131|GO:0051177|GO:0051321
Stsc151211g00002 370 Coils Coil 336 336 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151211g00002 Stsc-Chr151211 23469 26295 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151211g00002 79 174 PHD Transcription Factor Family AT5G22260 37.113 4.35e-07 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151211g00002 - - gmx:100806484 444.891