Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151210g00010 ATGGAAGCCACTTCTATGACTCATCAGTTGTTGAAGGGCTTTTGTGATGGCACACAGTGGAAGTATGCTGTTTTTTGGAAGCTTAACCACCGTTTCCCCATGACTTTGACCTGGGAAGATGGATATTATGGTTACCAGAAATCTAATGAGACTGTGGAGAGTATGTGGGGTGACATCAATCTCAAATTCCCAGCTGAGACTTCAAGTGGTGAAAGTATTGATGATCCAGGGGATTATTCTGCTGGACTACTCATGGCTGAAATGTCTCATCATAAATACACTTTGGGAGAGGGGGTTGTTGGTAAGGTAGCTTTTACTGGGAATCATTGTTGGGCTAGTGAGGATATTCTAACCTATGGGTTGGATGCTAATTTAATACCTGAGTGTCCTGATGAATGGCTTCTTCAATTTGCCTCTGGCATCAAGACCATCGTACTGATACCAGTTCTTCCTCAAGGAGTTTTGCAATTTGGTTCATTTCAAGCGGTTGCTGAAGACCTGGAATTTGTTACCAATATCAAGGAGAAATTCCATTCAATTCATCTTCTGGCAGCAAATACTACAGCATTGAACTCTGGAGTTGATTATCAAGATTGGTCATTCTCAGCCCCAACAAATACTTTTATGGATATCTTGGATGAATCATCCAATATCACAAACAGTACACCAAAAACTGAAGTTTTGGGTAGAATTGCACCTTGTATGAATGCATCAACAAGGTTGAACCCAGCAATGTTGTCTCAGGTGGAGACAAAAGATAATCTGGACGAAGAGATATGGCCCTCTTCTCCATTGGTCAATGATGTGGGAATATTCCGAGAGATATCAAATGGATTAGGTTTGTACTCTGGTAAGATGGAGCAACAATTTGGAAGCAACGAAACTGGTTATGAGGATATCAAGAATCTGAATGGCTTCTTTGCTTTTCCATCGGAGTCTGAATTGCACAAAGTGCTTGGATCAGCAGCTCCATACAGGAAAACAAGCAACTCCATGTCTACACATACCTCTCTTGAGGATACTTTCAGTAACTCAACCTTTATATCCAATAATAAAGAACATGATTATACTGAGAGTTTGGAGCACCCTGAAGATGTTGATCCGAAATATCTCTTGGATGCTGCTTTTGGGGATTTATTTAGTGCCTGTGATGATACTTCAAGCATATCCAACAGTTTTAGGTCCCATGTAAGCAAGCAGATGGCGTTCACTGGTTCAATTCATCCCAGGATCAGTTGTGAAGAAAGCAGTTTGGTTATGAAAGATGTGAAAAGTGATCTTAAGCCGGCAGTTACAGTCAAGGGCGGAGATGCTATTACATCACCATCTTTTGATGGAAATTCAAGCTTATTGACTGATGAGCCTCAAGAAGAACAGGTTTATAGTCATGTGCGATCTACTGATGGACCAAAGATCTCTAGCACCAACAAGAAAAGAGCAAGGCCAGGTACTACCCAAAAGTCAAGGCCGAGAGATAGACAATTGATCATGGACAGGATGAAGGAGTTGAGGGAGCTTGTCCCAGATGGTGGAAAGTGTAGCATTGACAACCTCTTGGAGAGAACCATAAAGCATATGCTATACTTGAGAAAAATAACAAGCCAAGCTGAGAAGCTTAAGAGATTCGAACATAGAGAGGTTGCAGTAAACACATCAATATGTACCTTGGGAAAGAACAGTGAAAATGGGTGA 1692 0.4125 MEATSMTHQLLKGFCDGTQWKYAVFWKLNHRFPMTLTWEDGYYGYQKSNETVESMWGDINLKFPAETSSGESIDDPGDYSAGLLMAEMSHHKYTLGEGVVGKVAFTGNHCWASEDILTYGLDANLIPECPDEWLLQFASGIKTIVLIPVLPQGVLQFGSFQAVAEDLEFVTNIKEKFHSIHLLAANTTALNSGVDYQDWSFSAPTNTFMDILDESSNITNSTPKTEVLGRIAPCMNASTRLNPAMLSQVETKDNLDEEIWPSSPLVNDVGIFREISNGLGLYSGKMEQQFGSNETGYEDIKNLNGFFAFPSESELHKVLGSAAPYRKTSNSMSTHTSLEDTFSNSTFISNNKEHDYTESLEHPEDVDPKYLLDAAFGDLFSACDDTSSISNSFRSHVSKQMAFTGSIHPRISCEESSLVMKDVKSDLKPAVTVKGGDAITSPSFDGNSSLLTDEPQEEQVYSHVRSTDGPKISSTNKKRARPGTTQKSRPRDRQLIMDRMKELRELVPDGGKCSIDNLLERTIKHMLYLRKITSQAEKLKRFEHREVAVNTSICTLGKNSENG 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151210g00010 563 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 8 177 IPR025610 -
Stsc151210g00010 563 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 480 529 IPR011598 GO:0046983
Stsc151210g00010 563 MobiDBLite consensus disorder prediction 463 481 - -
Stsc151210g00010 563 MobiDBLite consensus disorder prediction 463 491 - -
Stsc151210g00010 563 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 6 218 IPR043561 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151210g00010 Stsc-Chr151210 45778 52320 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151210g00010 466 556 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 56.250 4.81e-26 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151210g00010 - - adu:107484428 973.77