Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151209g00002 ATGAACTGTGGAGGAGGTAATAACAACAACAAGATTGGTGGTGGTGGTGGTGATGAACATCAACAACAAAGAGAAAGAGGAGGTCCATGTGGTGCTTGCAAGTTCTTGAGAAGGAAGTGTGTGAAGGGATGCATATTTGCACCATACTTTGACTCAGATCAAGGAACAGCACACTTTGCTGCAGTGCATAAGGTTTTTGGTGCAAGCAATGCTTCTAAGCTTCTAATGAGGATTCCACCACATAAGAGGCTTGATGCTGTTGTCACTCTTTGTTATGAGGCTCTTGCTAGGGTTAGAGACCCTGTTTATGGTTGTGTTGCTCATATCTTTGCTCTTCAACAACAGGTTGTGAACTTGCAAGCAGAATTAACATATGTCCAGGCCCGTCTTGCTACAATGCATCGCTACCCTATAGCTGCTGCTGCTGCTTCTTCTTCACTTCCAAACCCTTCAAGCTCTTCACCACCAACTCTTCATTCATCATCCTTAGATCACTTAGCATCATCAAATGCTGACTTGCAAAATGCCTCTTACAACATATCCATGCACTTTGATCCTCCTCAGCCACCGCCACCGCACTCGTCATCATTAGAACCAAGCAGCTTCATCAACTCATCATATCAACAGCAACAACAACTGCTACTTGAAGATGGGGATCTCCAAACTTTGGCAAGAGAATTTGTCTCTAGGTACTTGCCTGGAGTAAGATTCCAGCCATCTAATAACTCTAACTAA 735 0.4381 MNCGGGNNNNKIGGGGGDEHQQQRERGGPCGACKFLRRKCVKGCIFAPYFDSDQGTAHFAAVHKVFGASNASKLLMRIPPHKRLDAVVTLCYEALARVRDPVYGCVAHIFALQQQVVNLQAELTYVQARLATMHRYPIAAAAASSSLPNPSSSSPPTLHSSSLDHLASSNADLQNASYNISMHFDPPQPPPPHSSSLEPSSFINSSYQQQQQLLLEDGDLQTLAREFVSRYLPGVRFQPSNNSN 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151209g00002 244 MobiDBLite consensus disorder prediction 144 163 - -
Stsc151209g00002 244 MobiDBLite consensus disorder prediction 1 23 - -
Stsc151209g00002 244 ProSiteProfiles LOB domain profile. 28 130 IPR004883 -
Stsc151209g00002 244 PANTHER LOB DOMAIN CONTAINING PROTEIN 26 193 - -
Stsc151209g00002 244 MobiDBLite consensus disorder prediction 180 201 - -
Stsc151209g00002 244 Pfam Lateral organ boundaries (LOB) domain 29 127 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151209g00002 Stsc-Chr151209 5214 10811 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151209g00002 27 241 AS2 family AT4G00210 54.630 6.83e-71 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Stsc151209g00002 LOB 3e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151209g00002 - - tpra:123898243 280.026