Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151207g00010 ATGGCAAAATTCAGAAAATTAATCACTCTTCTCCTCAACATATCCTTCCTATTCTTCCTAATTATCCTCCTAATAACACAACCTTCAAACATTCGTCATGAAAATTATCACAATTCCAAAAATGCCACCGCTGCCGCCACGGCCAAGAACAGAATGTTCAACCATGCAAGGCTTCTAACTAGTGACATCAGCGTAGAAGGCTGCACAGACCTCCATACATTCTCCGATTACGCTTCGAAATGCTACTACGTCCAAACCCACGAAGATTGCAGATCAAAGGGCTACATAAACTACCTCCACATCTTCTATTGCAATCTCGGAAACTCTCCGATCCTCGGCCACACTCTTCTATTTCTATGGCTCGCCGTCATGTTCTATCTTCTCGGCGACACCGCCTCAAACTACTTCTGCAACAATCTAGAAGGATTGTCCAAGATCCTAAGACTATCACCCACCATTGCAGGGGTTACCCTTCTCTCTCTAGGGAACGGTGCCCCCGATTTCTTTGCCAGCGTCGTCTCCTTCACGAAAACCAGCGACGGTGCCGTCGGTCTCAACAGCATTCTCGGTGGCGCTTTCTTTGTCTCGAGTGCTGTCATGGGAATCATAAGCATTCTCGTTTGCAAGAAAGAGGTTGCTGTTGATAAAGCGAGTTTCATTAGAGACGTGATTTTCTTCTTGTTCTCGCTCTTTGTTCTCTTGATCATGATCTCCATTGGGAAACTCACATTGTTGGGTTCGATCTGCTATGTTTCTATATATTTTCTTTATGTTTGTGCTGTTTCTGCAACGCATTTTATGTATGGAGATGATGAGAATCAAGAAGGTGATGTAGAGTTTGCAGTTGGGTCTTCGTCGGATGAATCGCTACTGGAATCGGGGAATATTCCGTTGTTGGGATATGTTGATGATGAGAAACCGAACCAGCGGTTAGAGAAAGTTGTTGAAGAAAGCAATGATGATGGTGAAGAGCAAAGAGGAACTTTTGATATTTTGAAACATGCAGAGTATAGGATATTGGATTGGAAGCACTTAGGAAAGCTTCTACAAATCCTAGAGCTACCACTTTCTTTACCAAGAAGGCTAACAATTCCAGTTGTGAGTGAAGAGAAATGGTCCAAGCCATATGCAGTTATCTCAGTGACACTAGCACCAGTTTTGTTAGCAACAGTTTACAACACCCAGAAGGAGAATGCGAGTTCAAGGAGCAGCTTAGTTACCTATTTAACCTCTTCATTGGTTGGAATCATCTTAGCCAACATGGCATGTGTCACCACCAAGAGTTGTAGCCCACCAAGGAGGTGCTTGTTCCCATGGCTATCTGGTGGCTTTGTAATGAGTGTGACATGGACTTACATCATTGCTGAGGAGCTTGTTTCACTCTTGGTATCAATTGGGAACATCATTGGGGTTAGCCCTTCAATTTTAGGGCTAACTGTCCTTGCTTGGGGTAATTCCCTAGGTGATTTGATAGCCAATGGTGCTATGGCTATGAATGGTGGGCCTGATGGGGCCCAAATGGCTATTTCTGGATGCTATGCTGGGCCCATGTTTAATACCTTAATGGGCTTGGGCTTGCCCCTTGTTCTCTCAGCATTGAATGATTACCCTGATCCTTATGTTATTCCTAAGGATACTTCATTGTATCAAACAATTCTGTTCTTGATGGGAGGGGTTCTTTGGGCCCTTGTGATTTTGCCAAAGAAGAACATGAAGCTGGATAAATCATTGGGGGTAGGACTTTTGACTATATACCTTTGCTTCTTGTTCATAAGGATAGCCATGGCTATTGGTGTGGTTCAATTCTAA 1809 0.4367 MAKFRKLITLLLNISFLFFLIILLITQPSNIRHENYHNSKNATAAATAKNRMFNHARLLTSDISVEGCTDLHTFSDYASKCYYVQTHEDCRSKGYINYLHIFYCNLGNSPILGHTLLFLWLAVMFYLLGDTASNYFCNNLEGLSKILRLSPTIAGVTLLSLGNGAPDFFASVVSFTKTSDGAVGLNSILGGAFFVSSAVMGIISILVCKKEVAVDKASFIRDVIFFLFSLFVLLIMISIGKLTLLGSICYVSIYFLYVCAVSATHFMYGDDENQEGDVEFAVGSSSDESLLESGNIPLLGYVDDEKPNQRLEKVVEESNDDGEEQRGTFDILKHAEYRILDWKHLGKLLQILELPLSLPRRLTIPVVSEEKWSKPYAVISVTLAPVLLATVYNTQKENASSRSSLVTYLTSSLVGIILANMACVTTKSCSPPRRCLFPWLSGGFVMSVTWTYIIAEELVSLLVSIGNIIGVSPSILGLTVLAWGNSLGDLIANGAMAMNGGPDGAQMAISGCYAGPMFNTLMGLGLPLVLSALNDYPDPYVIPKDTSLYQTILFLMGGVLWALVILPKKNMKLDKSLGVGLLTIYLCFLFIRIAMAIGVVQF 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151207g00010 602 Gene3D - 149 290 IPR044880 -
Stsc151207g00010 602 Gene3D - 377 594 IPR044880 -
Stsc151207g00010 602 Pfam Sodium/calcium exchanger protein 118 260 IPR004837 GO:0016020|GO:0055085
Stsc151207g00010 602 Pfam Sodium/calcium exchanger protein 442 593 IPR004837 GO:0016020|GO:0055085
Stsc151207g00010 602 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 12 601 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151207g00010 Stsc-Chr151207 75152 77899 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151207g00010 71 601 Antiporters AT5G17860 50.749 3.65e-178 513
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151207g00010 K13754 - gmx:100818583 807.749