Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151207g00009 ATGGGTTCTTCTTCCACCTTGTTGCTGAACGCGTCTTTCCTCATAGTTTTCTCTGCTTTCCTTGTTCTTCACTTCAACTCTCCTTCAGAACACGTTCCTCTGAGAAAGTACCGTTTTACCCTTGGTAGCATTGATGAGAATGATTCCTGCAAGAGCTTTCACAGCCTTGGTGACAACGAAGCAAAGTGCTTGTACTTGAAATCCAATGGCCCTTGTGTCACTGAGGGTTATGTTGATTATCTTTACCTTTTTTACTGCAAATTTGGGGATTCAACTTTTTTTGGTCACACCCTTTTGTTCCTTTGGCTATTGGTCTTGTTCTACCTTCTTGCCAGCACTGCTTCTGAGTACTTTTGTCCTTCCCTTGAAAGCCTCTCAAAATTGCTGAGATTGTCCCCAACAGTTGCTGGAGTTACCCTTCTTTCCCTTGGCAATGGTGCCTGTGATGTATTTGCAACACTTGTTTCCTTCAATGGCAGTGGCACTGATGGTATTGGATTCAACACTGTGCTTGGGGGTGCTTCCTTTGTGTCCTGTGTTGTGGTTGGGATTGTTAGCATATCGGTTCGCCACCAGGGTTTTCGGGTTAAGAAGTCTGCACTGATAAGAGATGTCTGTTTTCTTCTCTTTGTGCTCTTGTGCTTGTTCGCAATCTTAATCGCCGGCGAGATCAATGTTATTGGGGCAATTAGCTTCTGTTTGATGTATGTTGTTTATGTGGTTATTGTTTACATCTCATCGGCCCGGTGTAAGGGTGACTCTGTTGAGGCTACAAGCGATGGTCAATCGAACAATGGCGATGATTCGGCCGTGCCCCTTCTCAGTGGAATGGAGAAAGGAGTAGTAATTGGTAATGATGAAAATGGATCCCAAGAATGTAAGTTCAACTTCGAGGAGAAATGCTGCTTCAAGAAATCTCCAATATGTAGATTTTCGCTTCGTGTCTTGGAGTTGCCCCTTTACTTGCCAAGGAGATTGACAATTCCGGTTGTTTATGAAGAGAGATGGTCCAAACCATATGCAATTCTATCAGCTCTGTTAGCACCATTGCTATTGTCTTCTTTCTGGAACCCGGAAAGCCCAACAGTCTATGGAATCGGATTATTAATCGGAATCATTTTAGCTGTAGCCGCGTTCTTCACAACCGAGGCATCTAGTCCCCCGAAGAAGTACATGCTCCCTTGGCTTGCAGGGGGGTTTGTGATGAGTGTGACTTGGAGTTACATCTCAGCTCAAGAACTGGTTGGATTGCTGGTCTCGCTCGGTTACATATGCGGAATTAGTCCTTCAATTTTGGGGCTAACAGTTCTTGCTTGGGGAAATTCAATTGGAGACTTGGTAACAAATTTGACTATGGCATTACATGGTGGAACAGAAGGTGCTCAAATTGCAATATCAGGTTGTTATGCTGGCCCTATATTCAACACAGTAATTGGATTAGGCTTATCCCTTGTATGTTCAACTTGGTCACAGTATCCAAACTCTGTTACTATACCAAGAGATCCATATCTTTGGGAAACACTGTCACTTTTGGTAGTTGGATTGATTTGGGCACTTTTGGTGTTGGTAAGAAGGGACATGAAGCTTGATTCACTCTTAGGTGGAGGGCTTCTTGCTGTTTACTTCATTTCAATGTTTCTGAGGCTGATTCAGACATTAGGGTCTTGCCAATTTCAAGATCTATTACCATTTTTATGGTCTTGA 1704 0.4337 MGSSSTLLLNASFLIVFSAFLVLHFNSPSEHVPLRKYRFTLGSIDENDSCKSFHSLGDNEAKCLYLKSNGPCVTEGYVDYLYLFYCKFGDSTFFGHTLLFLWLLVLFYLLASTASEYFCPSLESLSKLLRLSPTVAGVTLLSLGNGACDVFATLVSFNGSGTDGIGFNTVLGGASFVSCVVVGIVSISVRHQGFRVKKSALIRDVCFLLFVLLCLFAILIAGEINVIGAISFCLMYVVYVVIVYISSARCKGDSVEATSDGQSNNGDDSAVPLLSGMEKGVVIGNDENGSQECKFNFEEKCCFKKSPICRFSLRVLELPLYLPRRLTIPVVYEERWSKPYAILSALLAPLLLSSFWNPESPTVYGIGLLIGIILAVAAFFTTEASSPPKKYMLPWLAGGFVMSVTWSYISAQELVGLLVSLGYICGISPSILGLTVLAWGNSIGDLVTNLTMALHGGTEGAQIAISGCYAGPIFNTVIGLGLSLVCSTWSQYPNSVTIPRDPYLWETLSLLVVGLIWALLVLVRRDMKLDSLLGGGLLAVYFISMFLRLIQTLGSCQFQDLLPFLWS 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151207g00009 567 Pfam Sodium/calcium exchanger protein 100 244 IPR004837 GO:0016020|GO:0055085
Stsc151207g00009 567 Pfam Sodium/calcium exchanger protein 396 548 IPR004837 GO:0016020|GO:0055085
Stsc151207g00009 567 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 10 556 - -
Stsc151207g00009 567 Gene3D - 131 260 IPR044880 -
Stsc151207g00009 567 Gene3D - 341 549 IPR044880 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151207g00009 Stsc-Chr151207 61585 64029 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151207g00009 9 557 Antiporters AT5G17850 52.113 1.45e-159 465
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151207g00009 K13754 - gmx:100787016 728.398