Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151205g00003 ATGTATTCTGATATGCATGGTTTTGATCTCTTCTCACACATGTTCAAAGAAGAAATAATCCCAGACCTTCTTTTCACTGATGATGATCCTTTCCCTCTCTTTACACCTCAAGAAAACATAATTGACTCTTCTCTTGATCCTTTTTCCCTTTCTTCTTTCTCCTTTTCCCCTCCATGCACTCATTTCTCTGCTTTGGATGCCTCTGAGTCCCAAGTGAGTGTGGCGGATCATTGTTCCTACAATCACAGTTACCTGCAGAGGAGCTCCAGCTGCAAATTGTTTGATAGAAAACCATCATGTGAAGTAGTTCATCACTCTGACACTTGGATGGATTCCCCAAGTTTTGAGTGGGAAAACGATTTCTTCAGAGGACAGATAAGGAGGGTCTTCAGTGCAGGAGACTTGAAAAACATGACTCAGAGGGATGAAGCAAACTTGAAAGTGGGGCGTTACAGTGCCCAAGAAAGGAAAGAGAAAATCTCAAAGTACAGGGCCAAGAGAAGCCAGAGGAAGTTCAACAAGACTATCAAGTATGCATGCCGAAAGACACTAGCCGACAATCGAGTTCGTATACGTGGCAGGTTCGCACGCAACGACGATACCAGCGTCATAACAAAAGCTCCATGTTCAAGTTATTCAAATACACAACAAGACCAAGATGAATTCTGGGTAAATAATGCAGTTTCACATCTGAAGCAGTAA 702 0.4259 MYSDMHGFDLFSHMFKEEIIPDLLFTDDDPFPLFTPQENIIDSSLDPFSLSSFSFSPPCTHFSALDASESQVSVADHCSYNHSYLQRSSSCKLFDRKPSCEVVHHSDTWMDSPSFEWENDFFRGQIRRVFSAGDLKNMTQRDEANLKVGRYSAQERKEKISKYRAKRSQRKFNKTIKYACRKTLADNRVRIRGRFARNDDTSVITKAPCSSYSNTQQDQDEFWVNNAVSHLKQ 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151205g00003 233 ProSiteProfiles CCT domain profile. 156 198 IPR010402 GO:0005515
Stsc151205g00003 233 Pfam CCT motif 156 198 IPR010402 GO:0005515
Stsc151205g00003 233 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 69 214 IPR045281 GO:0009909
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151205g00003 Stsc-Chr151205 9573 10886 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151205g00003 152 202 C2C2-CO-like Transcription Factor Family AT5G24930 50.980 1.59e-10 58.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Stsc151205g00003 CCT 1.4e-16 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151205g00003 - - ahf:112749670 282.337