Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151200g00014 ATGGACCATGACAAGACTGGATGCCAAGCTCCACCAGAAGGTCCTATATTGTGCATTAACAACTGTGGATTTTTCGGGAGTCCGGCTACCATGAACATGTGTTCCAAGTGCCACAAGGACATGATGCTGAAACAGGAGCAGGCCAAGCTTGCAGCATCTTCCATAGGAAATATTATGAATGGGTCATCAAGCAGCGCCGGTAGTGAACCTGTTATTGCCGCCAATGTGGATATTCCAGTCAATTCAACAGAGCCAAAAGCTATCTCGACGCAACCTTTATCGGCTTCAGGCTCAGAGGAGAGTGGTGAGGCAAAGCCCAAGGACGGTCCAAAACGTTGCAGCAGCTGCAATAAGAGGGTTGGTTTGACAGGATTTAATTGTCGATGTGNNNNNNNNNNCGTACATCGCTACTCAGACAAGCATGACTGCCCGTATGATTACCGTACTGCTGCACGGGATGCTATTGCGAAAGCAAACCCAGTTGTCAAGGCTGAGAAGCTTGATAAGATCTAG 513 0.4737 MDHDKTGCQAPPEGPILCINNCGFFGSPATMNMCSKCHKDMMLKQEQAKLAASSIGNIMNGSSSSAGSEPVIAANVDIPVNSTEPKAISTQPLSASGSEESGEAKPKDGPKRCSSCNKRVGLTGFNCRCXXXXVHRYSDKHDCPYDYRTAARDAIAKANPVVKAEKLDKI 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151200g00014 170 PANTHER AN1-TYPE ZINC FINGER PROTEIN 13 170 - -
Stsc151200g00014 170 SMART A20_3 15 39 IPR002653 GO:0003677|GO:0008270
Stsc151200g00014 170 ProSiteProfiles Zinc finger AN1-type profile. 107 151 IPR000058 GO:0008270
Stsc151200g00014 170 Pfam A20-like zinc finger 16 39 IPR002653 GO:0003677|GO:0008270
Stsc151200g00014 170 MobiDBLite consensus disorder prediction 82 98 - -
Stsc151200g00014 170 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 17 53 - -
Stsc151200g00014 170 Gene3D - 4 68 - -
Stsc151200g00014 170 MobiDBLite consensus disorder prediction 80 110 - -
Stsc151200g00014 170 ProSiteProfiles Zinc finger A20-type profile. 12 46 IPR002653 GO:0003677|GO:0008270
Stsc151200g00014 170 Gene3D - 87 166 IPR035896 -
Stsc151200g00014 170 SMART AN1_Zf_4 113 148 IPR000058 GO:0008270
Stsc151200g00014 170 FunFam Zinc finger AN1-type containing 6 86 166 - -
Stsc151200g00014 170 SUPERFAMILY AN1-like Zinc finger 97 165 IPR035896 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151200g00014 Stsc-Chr151200 76148 78421 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151200g00014 8 170 C2H2 Transcription Factor Family AT3G52800 42.197 8.49e-34 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151200g00014 - - qsa:O6P43_028135 280.796