Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151200g00007 ATGAATAGTTCTGGTTTGGGGGGTAGTTTTTTAGGTGGTCCTGGTGGGGGGATCTTGGACCTTGAATTGCCATTTCAAAGGCACCAACAACAATCCCAGATGGGTCATCCATCAGTGACTGGACAGCATCACTTGAATATGAGGACTGATCTGGAAAATGATCATCCAATTGGCCTCATGGAACTCAAAGGGTCCAATGCGGCGGCGCATTTCTGTAAAGGAAAGGGAATTGCTTCTTCTAATCCTGCCAATAGTAATGAATTGAGCGACGACGACGATGCAGAAGATGGAAATTGCGACAACTTTGATGGCGGAAAGAGCAAGAAAGGGTCTCCTTGGCAAAGAATGAAGTGGACAGACAATGTGGTTCAGCTTCTTATAGCTGTGGTGAGCTGTGTGGGAGATGATGGCTCCATTAATGGCGCAGATGGTCATAAGAGGAAATCCGGTGTCTTGCAAAAGAAGGGCAAGTGGAAAACCGTCTCCAAGATAATGATCAGCAAGGGTTGCCATGTGTCGCCGCAGCAGTGCGAGGACAAGTTTAACGACTTAAATAAGAGGTACAAGAGGTTAAATGAGATACTTGGGAGGGGAACTTGTTGCCAAGTGGTTGAGAATCCTACACTGATGGATTCGATGCCAAACCTCTCGGCTAAGGCGAAGGATGATGTTAGAAAGATATTGAGCTCAAAGCACCTGTTTTATAAGGAGATGTGTGCCTACCATAATGGGCAGAGGATACCAAACTCCCATGATCTTGACTTACAAGGTTATTCTTTGGATCATGGTAGGGACTCCAGAGATAACAACGGCTCTGAGGATGAAGCTGAGGATAACAATGAAAGCGATGATGATGACGATGATGATGATGACTTGGATAATGCACATGGGGATGGAGAGAGGACGGATGAGTTCTGTGATAGAAGAAAATCTAGTGAAGAGGATTTCCGTTTTTGGCCACAATCTATTGAGATGGATAAATTCGAAGTTGAAATGGCAAGGGTTTTTCAAGACCCAACAAAGTCAGTGAGGGAACGAAGAGAGTGGATCAAGATAAAGATGTTGCAGCTTCAAGAGCAAAGAGTCAGCTGCCAAGTGCAAGCACTTGAGCTTGAAAAACAACGGTTTAAGTGGTTGAGATACTGCAGCAAGAAGGATAGGGAGCTGGAGAGGCTGAGGTTGGAGAACGAAAGGATGAAACTGGAAAATGAGCGCAGGGTCTTGAAACTGAAGCAGAAAGAGCAGGAGACAAATTTAAGCAGGCCTGAGATGTCCTTAGACCCTGCTTCTCTCGGAATCAATAGATCACAAGGGAGGGAGCATTTCAACTTGGGCTGA 1338 0.4544 MNSSGLGGSFLGGPGGGILDLELPFQRHQQQSQMGHPSVTGQHHLNMRTDLENDHPIGLMELKGSNAAAHFCKGKGIASSNPANSNELSDDDDAEDGNCDNFDGGKSKKGSPWQRMKWTDNVVQLLIAVVSCVGDDGSINGADGHKRKSGVLQKKGKWKTVSKIMISKGCHVSPQQCEDKFNDLNKRYKRLNEILGRGTCCQVVENPTLMDSMPNLSAKAKDDVRKILSSKHLFYKEMCAYHNGQRIPNSHDLDLQGYSLDHGRDSRDNNGSEDEAEDNNESDDDDDDDDDLDNAHGDGERTDEFCDRRKSSEEDFRFWPQSIEMDKFEVEMARVFQDPTKSVRERREWIKIKMLQLQEQRVSCQVQALELEKQRFKWLRYCSKKDRELERLRLENERMKLENERRVLKLKQKEQETNLSRPEMSLDPASLGINRSQGREHFNLG 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151200g00007 445 Coils Coil 352 374 - -
Stsc151200g00007 445 MobiDBLite consensus disorder prediction 250 308 - -
Stsc151200g00007 445 MobiDBLite consensus disorder prediction 274 294 - -
Stsc151200g00007 445 MobiDBLite consensus disorder prediction 412 445 - -
Stsc151200g00007 445 Gene3D - 118 190 - -
Stsc151200g00007 445 PANTHER F16F4.11 PROTEIN-RELATED 2 419 - -
Stsc151200g00007 445 MobiDBLite consensus disorder prediction 257 273 - -
Stsc151200g00007 445 Pfam Myb/SANT-like DNA-binding domain 115 240 IPR044822 -
Stsc151200g00007 445 MobiDBLite consensus disorder prediction 421 445 - -
Stsc151200g00007 445 MobiDBLite consensus disorder prediction 79 113 - -
Stsc151200g00007 445 Coils Coil 382 418 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151200g00007 Stsc-Chr151200 41782 44337 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Stsc151200g00007 Myb_DNA-bind_4 2.9e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151200g00007 - - gmx:100798932 634.795