Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151200g00006 ATGATGGCTGGTAGGAACCATCAGAACCCAACAATGGTGCAAAAGTTTCCTGTTCTGAAGCATCAGCAAGAGTTTCCATATGGAACCTACTCAAATGGTGGCTTAAACTATGCTTTGATGGCAGCATCATCATGCAAAGCAAGTTCATCAAGTGATGTGCATTCTGCAGGTTCAGCTGTGTTTGTCCCATCTCCATCAGAGAAAAGCTTTGCAAGCTTTGCCACCAATTTTCTCATGGGAGGAGTGTCTGCTGCAGTGTCCAAGACTGCAGTAGCTCCGCTCGAGCGCGCAAAGCTTCTACTTCAAAACCAAGATGAGATGATCAAGGCTGGTAGGCTCTCCGAGCCTTACAAGGGAATCGGAGACTGTTTTGCCAGATCAGTCCGAGACGAAGGGATCGGTTCACTCTGGAGAGGGAACACTGTCAATGTTATCCGTTACTTCCCAACACAGGCCTTAAACTTTGCATTTAAAGACTACTTTAAGGGACAATTCAACTTCAACAAAGACAGAGATGGGTACTGGAAGTGGTTTGGAGGTAACTTGTTATCCGGGAGCGCCGCGGGAGCTGCGTCGTCGGTGTTTGTTTATTCACTGGATTATGCTAGAACCCGGCTTACGAATGATGCCAAGGCTGGTGGACAGAGGCAGTTCAATGGTTTGGTTGATGTTTATAGGAAGACTATTAGATCTGATGGCATTGCTGGCCTTTACCGTGGCTTCAACATTTCTCTTGCTGGAATCATTGTCTACCGTGGTTTGTACTTTGGAATCTATGATTCTGTTAAGCCTGTGCTCTTGGTAGGATCATTGCAGGATAGTTTCTTGGCAAGTTTTGCTCTGGGGTGGGTTGTTACAAATGCTGCAGCATTTGCTTCCTATCCAATAGACACTGTCCGTAGAAGGATGATGATGACATCAGGAGAAGCCATCAAGTATAAGAGCTCCATGGATGCATTCTCCCAAATTCTGAAGAAGGAAGGTCCTAAATCACTCTTCAAAGGTGCGGGCGCTAACATCCTCCGTGCCATGGCTAGCGCCGGCGTGCTCGCCGGCTATGACAAACTTCAGCTTCTTCTCTTGGGAAAGAAGTATGCTTCTGGGGGATCTTAA 1113 0.469 MMAGRNHQNPTMVQKFPVLKHQQEFPYGTYSNGGLNYALMAASSCKASSSSDVHSAGSAVFVPSPSEKSFASFATNFLMGGVSAAVSKTAVAPLERAKLLLQNQDEMIKAGRLSEPYKGIGDCFARSVRDEGIGSLWRGNTVNVIRYFPTQALNFAFKDYFKGQFNFNKDRDGYWKWFGGNLLSGSAAGAASSVFVYSLDYARTRLTNDAKAGGQRQFNGLVDVYRKTIRSDGIAGLYRGFNISLAGIIVYRGLYFGIYDSVKPVLLVGSLQDSFLASFALGWVVTNAAAFASYPIDTVRRRMMMTSGEAIKYKSSMDAFSQILKKEGPKSLFKGAGANILRAMASAGVLAGYDKLQLLLLGKKYASGGS 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151200g00006 370 ProSiteProfiles Solute carrier (Solcar) repeat profile. 71 164 IPR018108 -
Stsc151200g00006 370 PRINTS Mitochondrial carrier protein signature 89 103 IPR002067 GO:0055085
Stsc151200g00006 370 PRINTS Mitochondrial carrier protein signature 238 256 IPR002067 GO:0055085
Stsc151200g00006 370 PRINTS Mitochondrial carrier protein signature 282 304 IPR002067 GO:0055085
Stsc151200g00006 370 PRINTS Mitochondrial carrier protein signature 76 89 IPR002067 GO:0055085
Stsc151200g00006 370 PRINTS Mitochondrial carrier protein signature 139 159 IPR002067 GO:0055085
Stsc151200g00006 370 PRINTS Mitochondrial carrier protein signature 191 209 IPR002067 GO:0055085
Stsc151200g00006 370 Pfam Mitochondrial carrier protein 274 362 IPR018108 -
Stsc151200g00006 370 Pfam Mitochondrial carrier protein 175 266 IPR018108 -
Stsc151200g00006 370 Pfam Mitochondrial carrier protein 72 167 IPR018108 -
Stsc151200g00006 370 Gene3D Mitochondrial carrier domain 74 366 IPR023395 -
Stsc151200g00006 370 ProSiteProfiles Solute carrier (Solcar) repeat profile. 176 265 IPR018108 -
Stsc151200g00006 370 SUPERFAMILY Mitochondrial carrier 70 355 IPR023395 -
Stsc151200g00006 370 PANTHER ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED 64 369 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Stsc151200g00006 370 FunFam ADP,ATP carrier protein, mitochondrial 74 366 - -
Stsc151200g00006 370 ProSiteProfiles Solute carrier (Solcar) repeat profile. 273 359 IPR018108 -
Stsc151200g00006 370 PRINTS Adenine nucleotide translocator signature 150 162 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Stsc151200g00006 370 PRINTS Adenine nucleotide translocator signature 117 138 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Stsc151200g00006 370 PRINTS Adenine nucleotide translocator signature 73 85 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Stsc151200g00006 370 PRINTS Adenine nucleotide translocator signature 278 294 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Stsc151200g00006 370 PRINTS Adenine nucleotide translocator signature 176 189 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151200g00006 Stsc-Chr151200 38962 40794 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151200g00006 21 370 Antiporters AT5G13490 74.859 0.0 530
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151200g00006 K05863 - jre:108998717 542.732