Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151200g00001 ATGGAGAACTACTCATCACTGGAGAGAGATGTAAGAGACATGAGGGCTTATTTTGGGACTGGGAAAACAAAGGAAGCAACATGGAGAGAATCTCAGCTTAAAGCTTTGCGTAAATTCCTTCTTGAAAATGAGGATCACATCTTCAAGGCCCTCAACAACGATCTGGGCAAGCATCAAGTTGAAGCTTTTAGAGATGAGGTGGGAACTTTGGTTAAGACCTTAAATTTAGCCATCAAGTCTTTGAAACAATGGATGGCAGGGAAAGAGGCTAAACTGCCAAGAATAGCATTGCTTTCCAGTGCAGAAATAGTTCCTGAGCCTCTTGGCCTTGTTCTCATATTCTCATCATGGAATTTCCCCTTCGGACTGTCATTGGAGCCATTAATAGGAGCTGTAGCTGCTGGAAACAGTGTAGTTCTGAAGCCATCAGAAATGTCACCTGCTTGTTCTTCTCTTCTAACCTCTGTTCTCCCTTCTTACTTGGATTCCAACGCTATTATGATCATCCAAGGTGGACCTTCTCTTGGGGAGCTACTCTTAAAGCAGACATGGGACAAGATCTTTTTCACAGGAAGTGCAAGAGTGGGGAAAATTGTTATGAGTGCAGCAGCAGAGAATCTGACACCTGTGAGTTTGGAATTGGGAGGAAAATGTCCTGCATTGCTTGACTCCCTTACAAGTTCTTGGGATAGAGAGGTTCTTTTACTGAAGGTGGCTGTGAAACGAATTTTGGTGGCCAAATATGGAGCTTGTGCAGGACAAGCATGCATAGCCATCGATTATGTGCTTGTAGAAAACTCTTTCATTTCTACATTGTTGCCATTACTGAAGGTTTGGATTAAGAAAATGTTTGGAGAAAACCCAAAAGGTTCCAACAGCATTGCAAGGATAGTTAATAAGCAACATTTCTTGAGACTCAAGTCTCTTATCAATGATGATCCTAAGGTCAAAGAATCGGTCGTTATTGGTGGTTCATTTGACGAAGATAATTTATTTATTGAACCAACCATATTGGTGGATCCGCCTCTTGACTCTGCAATCATGACAGAAGAAATTTTTGGCCCACTCCTTCCAATTATCACTGTGGAGAAGATTGAAGATAGTGTTGGATTCATAAAGTCAAGGCCTAAACCTCTAGCAATCTATGCATTTACTAAAAACAAATCTCTACAGAAAAGGATGTTAGATGAGACATCTTCTGGAAGTCTTGTATTCAATGATGCAATTCTACAATATGTAGCTGATACCCTGCCATTTGGAGGAGTTGGTGAGAGTGGATTTGGAAAGTACCATGGCAAGTTCTCCTTTGACACTTTCAGTCACCACAAGGCAGTGGCCAGAAGAAGTTACTACACAGATTTTTGGTTCAGGTTTCCTCCATGGACTCTTAACAAGCTTCAACTCCTTGAGGTTGCTTACAATTTGGACTATATTGGCATGCTCCTTGTCATTCTTGGCTTAAAGGGATCAAAACGAAGATTAATTAATCAAGACGAAAAGCTACACGACAAGCAATTTTAA 1521 0.4103 MENYSSLERDVRDMRAYFGTGKTKEATWRESQLKALRKFLLENEDHIFKALNNDLGKHQVEAFRDEVGTLVKTLNLAIKSLKQWMAGKEAKLPRIALLSSAEIVPEPLGLVLIFSSWNFPFGLSLEPLIGAVAAGNSVVLKPSEMSPACSSLLTSVLPSYLDSNAIMIIQGGPSLGELLLKQTWDKIFFTGSARVGKIVMSAAAENLTPVSLELGGKCPALLDSLTSSWDREVLLLKVAVKRILVAKYGACAGQACIAIDYVLVENSFISTLLPLLKVWIKKMFGENPKGSNSIARIVNKQHFLRLKSLINDDPKVKESVVIGGSFDEDNLFIEPTILVDPPLDSAIMTEEIFGPLLPIITVEKIEDSVGFIKSRPKPLAIYAFTKNKSLQKRMLDETSSGSLVFNDAILQYVADTLPFGGVGESGFGKYHGKFSFDTFSHHKAVARRSYYTDFWFRFPPWTLNKLQLLEVAYNLDYIGMLLVILGLKGSKRRLINQDEKLHDKQF 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151200g00001 506 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 216 425 IPR016163 GO:0016620
Stsc151200g00001 506 FunFam Aldehyde dehydrogenase 216 425 - -
Stsc151200g00001 506 SUPERFAMILY ALDH-like 10 462 IPR016161 GO:0016491
Stsc151200g00001 506 PANTHER ALDEHYDE DEHYDROGENASE 5 487 IPR012394 GO:0006081
Stsc151200g00001 506 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 15 443 IPR016162 GO:0016491
Stsc151200g00001 506 FunFam Aldehyde dehydrogenase 15 219 - -
Stsc151200g00001 506 Pfam Aldehyde dehydrogenase family 9 445 IPR015590 GO:0016491
Stsc151200g00001 506 PIRSF ALDH 1 481 IPR012394 GO:0006081
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151200g00001 Stsc-Chr151200 1879 5186 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151200g00001 6 488 Aldehyde Dehydrogenase Gene Family AT4G36250 53.209 0.0 554
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151200g00001 K00128 - gmx:100819197 786.563