Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc1511g00001 ATGTGTGATCTTAGTTATGATTTCTACGATGAAACTTGCCCGTCCATCTTCGATGTTGTTCGGACGGAAATGTTGTCGGCCAGGGCCAACGATTTGAGGATTCCGGCTTCTCTCTTGCGCCTTCATTTCCATGATTGTTTTGTCCTCGGTTGTGATGGGTCTGTGCTTCTTGATGATACCATCAATTTTACGGGGGAGAAAAATGCAGTTCCTAATAAGAATTCAGCAAGAGGATTTGGGGTAATTGACAAAATCAAGTATGTTTTAGAGAATAAATGTCCATCCACAGTTTCATGTGCTGATATTCTAGCTCTTGCAGCCAGAGATGCTGTTGTTCTTAGCTATGGACCTCGTTGGAGGGTACTCTTAGGTCGTAGAGATGGAAGAAGAGCAAGCTTTGCTGAGGCAAATGATTTGCCTTCACCATTAGATTCTATAGAAAATATTACATACAAGTTTAGGTTGAAAGGTCTTGATACAAATGATGTAGCAGCTCTTTCTGGTGCACACACCATAGGCTTGGTACAGTGCAGGTTTTTCAAGGAAAGGCTATATAACTTCAATAACACTGGTAAACCAGATCCAACACTTGACCCAATACTTGTCAAAGAGTTGCAGATAATTTGTGGATGCCCAAATTATACATTTGATTCCAATCTTTCTCCCTTGGACCGTGGCACTCCAATCCTATTTGACAACAATTATTACACAAACGTTGACACCAAAAGGGGGATACTCTCGTCGGATCATGCTCTACTTAATGATGATACCATTTCTTCCTTGGTCAATAAATATAGTCAAAACCAGGATCTGTTTTTCAATGACTTTGTAGTTTCAATGGAGAAGATGGGACGCATTGGTGTGCTTTTAGGGCAACAAGGGGAGATTAGGACAAACTGTAGCAGGATCAACTATTACTAA 921 0.4072 MCDLSYDFYDETCPSIFDVVRTEMLSARANDLRIPASLLRLHFHDCFVLGCDGSVLLDDTINFTGEKNAVPNKNSARGFGVIDKIKYVLENKCPSTVSCADILALAARDAVVLSYGPRWRVLLGRRDGRRASFAEANDLPSPLDSIENITYKFRLKGLDTNDVAALSGAHTIGLVQCRFFKERLYNFNNTGKPDPTLDPILVKELQIICGCPNYTFDSNLSPLDRGTPILFDNNYYTNVDTKRGILSSDHALLNDDTISSLVNKYSQNQDLFFNDFVVSMEKMGRIGVLLGQQGEIRTNCSRINYY 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc1511g00001 306 PANTHER PEROXIDASE 72-RELATED 4 302 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc1511g00001 306 CDD secretory_peroxidase 4 303 IPR033905 GO:0004601|GO:0042744
Stsc1511g00001 306 FunFam Peroxidase 140 283 - -
Stsc1511g00001 306 Pfam Peroxidase 28 268 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc1511g00001 306 PRINTS Plant peroxidase signature 77 90 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc1511g00001 306 PRINTS Plant peroxidase signature 278 291 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc1511g00001 306 PRINTS Plant peroxidase signature 13 32 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc1511g00001 306 PRINTS Plant peroxidase signature 37 57 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc1511g00001 306 PRINTS Plant peroxidase signature 238 255 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc1511g00001 306 PRINTS Plant peroxidase signature 222 237 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc1511g00001 306 PRINTS Plant peroxidase signature 161 173 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc1511g00001 306 PRINTS Plant peroxidase signature 96 106 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc1511g00001 306 PRINTS Plant peroxidase signature 115 130 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc1511g00001 306 FunFam Peroxidase 7 154 - -
Stsc1511g00001 306 Gene3D Peroxidase, domain 2 140 283 - -
Stsc1511g00001 306 ProSiteProfiles Plant heme peroxidase family profile. 3 304 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc1511g00001 306 ProSitePatterns Peroxidases proximal heme-ligand signature. 162 172 IPR019793 -
Stsc1511g00001 306 Gene3D - 7 304 - -
Stsc1511g00001 306 PRINTS Haem peroxidase superfamily signature 162 177 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc1511g00001 306 PRINTS Haem peroxidase superfamily signature 97 114 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc1511g00001 306 PRINTS Haem peroxidase superfamily signature 35 49 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc1511g00001 306 PRINTS Haem peroxidase superfamily signature 115 127 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc1511g00001 306 PRINTS Haem peroxidase superfamily signature 224 239 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc1511g00001 306 SUPERFAMILY Heme-dependent peroxidases 4 304 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc1511g00001 Stsc-Chr1511 6784 8553 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc1511g00001 3 304 Peroxidase AT5G06720 50.820 1.07e-105 310
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc1511g00001 K00430 - gmx:100815708 360.533