Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151199g00003 ATGGGAACTGCCTCCAGGCAGTTGAAGGTCATGCTTCGCAAGAACTGGCTCCTCAAAATTCGTCATCCTTTCGTTACTGCGGCTGAGATATTGCTCCCTGCGGTTGTGTTGTTGCTGTTAGTGATTGTAAGGACGCAAGTGGACACTCAAATTCATCCGGCTGAACCGCACATTCAGAAAGAGATGTTTGTGGAGGTGGGTAAAGGTATATCCCCTAACTTCCCACAAGTTTTGGAATCCTTGTGGGAGAAAGGAGAGTATTTAGCTTTTGCACCAGATACTGATGAGACGAAGCTGATGATAGATGTAGTGTCCATAAAATTCCCACTCTTGAAGCTTGTTAGTCGAGTGTACAAAGATGAGGTAGAGTTGGAAAATTACATTCGCTCAGATGCTTATGGTACCTGCAGTGATGCAAGGAATTGTTCAAATCCCAAAATTAAAGGAGCTATTGTATTTTATGAACAAGGTCCTCAGTCATTTGATTATAGCATACGCCTCAATCATACATGGGCATTCTCCGGTTTCCCAGATGTAAAAACAATAATGGACACAAATGGTGCATTTCTTAACGACTTGGAACTGGGTGTTAGTGCTGTGCCAACAATGCAGTACAGCTTCAGTGGGTTTTTTACTCTCCAGCAAATGGTTGATTCATTTATAATATTCATTGCTCAACAGTCTGACATAAATCCCAGCACTGAACGTGTAAAGCTTCCTCTATCAGGCTTTTATGACACCGATTTCTCTCTGAATACCACATGGACTCAGTTTAACCCTGCTCAGATACGTGTAGCTCCATTTCCTACTCGAGAGTACACTGATGATCAGTTCCAATCAATCATAAAGAAAGTCATGGGAATATTATACCTATTGGGTTTTCTCTATCCAGTTTCACGCCTCATCAGTTATTCTGTTTTTGAGAAGGAACAGAAGATTAAAGAAGGACTCTATATGATGGGCCTGAAAGATGGGATATTTCATCTCTCTTGGTTTATTACATATGCTTTGCAGTTTGCAATATCTTCCTGGATCATTACTGCTTGCACCATGGATAATTTATTCAAGTATAGTGATAAAACATTGGTGTTTGCCTACTTTTTCACTTTTGGGCTTAGTGCAATCATGCTGTCATTTTTTATATCAACATTTTTCAAACGGGCCAAAACAGCTGTTGCGGTTGGAACACTGTCTTTTCTTGGTGCTTTTTTCCCTTATTACACTGTCAATGATGAGGGCGTTTCAATGGTATTGAAGGTTCTTGCTTCTGTACTTTCACCTACAGCCTTCGCTCTTGGGTCAGTTAACTTTGCTGATTATGAGCGTGCTCATGTGGGACTACGCTGGACCAACATATGGCGGGAATCCTCAGGAGTGAATTTTTCCCTATGTCTTTTGATGATGATACTTGATACACTGCTATATTGTGCAATAGGTCTATATTTTGACAAGGTTCTTCCACGGGAGTATGGACGGCGATACCCATGGTCTTTTGTTTTCCGAAGAGACTTCTGGAGAAAGAATAAAATTGCTGGTAGGAATTCCGAGTCAGATAGAAATCTATTAGGGAAAGATACTTCTAAACCTTCTATAGAAGCAATAAGCCTAGATATGAAACAACAGGAGCTTGATGGCAGGTGCATTCAAATCCGGAATTTGCATAAAGTGTATGCTACTAAAAAGGGAGATTGCTGTGCCGTTAACTCCTTACAACTTACGTTGTATGAACATCAGATTCTTGCTCTTCTAGGGGATGCTTTGGTGTTTGGAAAGAACATCGTGTCAGATCTTGATGAGATACGGAAGGTTTTGGGTGTGTGCCCACAACATGATATTCTCTTTCCTGAATTGACTGTGAGGGAGCATTTAGAAATATTTGCCATATTAAAGGGTGTCAATGAAGACTCACTGGAGGGTGTCGTTACCAATATGGCTGATGAGGTAGGCCTGGCTGATAAAATTAACAGTGTTGTGAGAGCTCTTTCTGGTGGCATGAAGAGGAAATTGTCTCTTGGAATTGCATTGATTGGGAACAGTAAGGTTATAATTCTTGATGAACCTACCAGCGGAATGGATCCATACTCAATGCGTTTGACTTGGCAGTTAATAAAAAAATTTAAGAAGGGAAGGATAATCTTACTAACAACTCATTCAATGGATGAAGCAGATGAACTAGGTGATCGGATAGCTATCATGGCCAATGGTTCTCTGAAATGCTGTGGAAGCTCACTTTTCTTGAAGCATCATTATGGAGTTGGTTATACTCTAACTCTTGTAAAGTCAGCTCCCACTGTTTCTATAGCTAGTGATATAGTATATCGCCATGTTCCCTCAGCTACCTGTGTAAGCGAGGTGGGAACTGAGATTTCCTTTAGGCTTCCACTAGCATCTTCATCAGCTTTTGAGGGGATGTTTAGGGAAGTTGAAGGTTGTATGAAAAATCCAGTTTTGAACATGGAAATAAGTGGTAGTGGTAACAACGACAGTCTTGGTATTGAAAGCTATGGTATATCTGTCACAACCCTAGAGGAGGTATTTTTGAGAGTTGCAGGATGTGACTATGATGGAGTCGAACACTTTGAGGAAAATGACCATTCCCTCGTGCCTGACTCTGTGGCTTTGCTTGGTTCTTATGACCATCCATCCACCAAAAAATGTTTTTTGGGGAATTATAAGAAGTTGCTTGGTCTGATATCTAGCATAGTGGCAGGAGCTTGTGGTTTGATTTTTGCTATGGTTATAAGTTTCATAAACTTTGTGGGTATGCTGTGTTGTAGCTGTTGTCTCATTTCTGGGTCAACATTCTGGCAACATTCTAGAGCTTTGTTCATTAAAAGGGCAATATCTGCTCGGAGAGATCACAAAACAATTATATTCCAGCTAATGATTCCTGCTGTTTTCTTGCTCATTGGCCTTCTATTTCTCAAGCTCAAGCCACATCCTGATCAGCAGGGTCTGACCCTTTCAACTTCTTATTTTAACCCTCTGTTGACTGGTGGGGGTGGGGGAGGTCCAATTCCTTTTAATCTATCTTTGCCTATTGCTGAAAAGGTAGCACAAAATGTGAAAGGAGGGTGGATTCAAAGGTACAAGCCAAGCTCATATAAGTTCCCTAATTCAGGGAAGGCATTAACTGATGCAGTGGAAGCAGCAGGGCCAACTCTAGGACCAGCTCTACTTTCAATGAGTGAATATTTGATGTCGAGCTTTAATGAATCCTATCAATCTAGGTACGGGGCAATTGTGATGGATGATCAAAATAATGATGGGAGCTTAGGCTACACGGTATTGCACAACTGTTCTTGCCAGCATTCTGCTCCCACCTTTATCAACGTTATGAACAGTGCAATTCTTAGACTTGCTACTGGTGACACAAATATGACAATTCAGACACGCAACCACCCACTACCAATGACACAAAGCCAGCTCATACAACGTCATGACCTGGATGCCTTCTCTGCTGCAATTATTGTCAATATTGCATTCTCTTTCATACCTGCCTCATTTGCTGTTTCCATTGTCAAGGAACGTGAAGTGAAAGCTAAGCACCAGCAGCTAATTAGTGGGGTTTCTGTCCTTTCATATTGGGCTTCTACATATATTTGGGATTTCGTGAGCTTCTTGTTTCCGGCCTCATTTGCCATAATTCTCTTTTACATTTTTGGTTTGGATCAATTTGTTGGTGGGGTTTCTTTGTTACCAACTACAGTGATGCTTTTGGAATATGGACTTGCAATTGCATCATCGACTTATTGCCTTACATTTTTCTTTTTTGACCATACTGTGGCTCAGAACGTGGTTCTTTTAATTCACTTCTTCACTGGATTGATTCTAATGGTTATCTCATTCATTATGGGACTTATACCAAACACAATAACTGCCAATACTTTTCTTAAGAATTTTTTTAGAATATCTCCTGGATTTTGTTTTGCCGATGGTCTTGCTTCATTGGCACTTCTGCGGCAAGGAATGAAAGATAAAACAAGTGATGGGATATTTGATTGGAATGTTACGGGTGCCTCCATTTGTTATCTTGCTGTTGAGAGCATTGGTTACTTTTTGTTGACACTTGCACTTGAAGTTTGCCCCTCTCTCAAATTGACTCCATTTATGATCAAGAAGTGGTGGCAGAGTTTAAACATCTTCCACCGTAATACCAGTTATCTAGAACCTCTCTTAGAACCTTCATTGGAAACTGTTCCAATGGACGTTGATGAAGATGTGGATGTGAAAACCGAAAGAAATAGAGTACTTTCAGGTTCCCTTGATAATTCCATTATCTACCTGCGTAATCTTCGTAAGGTGTATCCTGAAGAGAAGTATCTAGGTAAAAAGGTTGCAGTAGATTCGTTAACCTTTTCAGTTCAGGAAGGAGAATGTTTCGGCTTTTTAGGAACAAATGGAGCTGGAAAGACCACAACTCTTTCTATGTTATGCGGGGAAGAATCTCCTTCTAATGGAACCGCTTTTATTTTTGGCAAAGATATATGCTCCCATCCCAAGGCTGCTCGCCGATATATTGGATATTGTCCGCAATTTGATGCTTTATTGGAGTTTTTGACCGTTCAAGAGCATCTTGAGCTTTATGCTAGAATAAAAGGTGTTCCAGAATACACTATAGACAATGTTGTTAAGGAAAAGATGATGGAATTTGGCTTATTGAAGCATGCTAATAAACCATCATTTACTCTTAGTGGGGGGAATAAAAGGAAACTGTCTGTTGCAATTGCAATGATTGGAGATCCTCCTATTGTCATCCTTGATGAACCATCTACAGGTATGGATCCCATAGCCAAAAGATTTATGTGGGATGTCATATCCAGGATCTCAACAAGAAGGGGGAAAACTGCAGTAATTCTAACTACCCACAGCATGAATGAAGCTCAGGCCTTATGTACTAGGATAGGAATAATGGTTGGTGGGCGACTAAGATGCATTGGAAGTCCTCAGCATTTAAAAACAAGATTTGGGAATCATCTGGAACTAGAGGTAAAACCTACTGAAGTGAATCCTGCAGACTTGCAAACACTATGCCAAGCTATTCAGGAAAGAGTTTTTGATGTCCCTTCTCATCCTAGAAGCTTGCTTAGCGACCTTGAAGTTTGCATCGGTGGCCCTGATTCCATTCGCGCAGAAAATAGTTCCATTGCAGAGATTAGCTTGACACGAGGAATGATAGGTTTAATTGGGCGCTGGCTTGGCAATGAAGAAAGAGTCAAGACACTAATCTCCTGTACACCTGTCTCTGATGGAGCTTCCGGGGAACAATTATCTGAACAATTGTTTCGAGATGGTGGTATTCCATTACCAGTATTTTCTGAGTGGTGGTTGTCAAAACAAAAGTTCTCAGAAATTGATTCATTTATACTTTCATCATTTCGGGGAGCAAGGTGGCAAGGGTGCAATGGCTTGAACATCAGATACCAGATACCCTACGAAGAAGGTCTATCTCTGGCAGATGTCTTTGGTCTCCTTGAAGGAAACAGAAATAGATTAGGGATTGCTGAGTACAGCATCAGCCAGTCAACTCTGGAGACGATATTTAATCATTTTGCAGCTAATTCATGA 5568 0.4077 MGTASRQLKVMLRKNWLLKIRHPFVTAAEILLPAVVLLLLVIVRTQVDTQIHPAEPHIQKEMFVEVGKGISPNFPQVLESLWEKGEYLAFAPDTDETKLMIDVVSIKFPLLKLVSRVYKDEVELENYIRSDAYGTCSDARNCSNPKIKGAIVFYEQGPQSFDYSIRLNHTWAFSGFPDVKTIMDTNGAFLNDLELGVSAVPTMQYSFSGFFTLQQMVDSFIIFIAQQSDINPSTERVKLPLSGFYDTDFSLNTTWTQFNPAQIRVAPFPTREYTDDQFQSIIKKVMGILYLLGFLYPVSRLISYSVFEKEQKIKEGLYMMGLKDGIFHLSWFITYALQFAISSWIITACTMDNLFKYSDKTLVFAYFFTFGLSAIMLSFFISTFFKRAKTAVAVGTLSFLGAFFPYYTVNDEGVSMVLKVLASVLSPTAFALGSVNFADYERAHVGLRWTNIWRESSGVNFSLCLLMMILDTLLYCAIGLYFDKVLPREYGRRYPWSFVFRRDFWRKNKIAGRNSESDRNLLGKDTSKPSIEAISLDMKQQELDGRCIQIRNLHKVYATKKGDCCAVNSLQLTLYEHQILALLGDALVFGKNIVSDLDEIRKVLGVCPQHDILFPELTVREHLEIFAILKGVNEDSLEGVVTNMADEVGLADKINSVVRALSGGMKRKLSLGIALIGNSKVIILDEPTSGMDPYSMRLTWQLIKKFKKGRIILLTTHSMDEADELGDRIAIMANGSLKCCGSSLFLKHHYGVGYTLTLVKSAPTVSIASDIVYRHVPSATCVSEVGTEISFRLPLASSSAFEGMFREVEGCMKNPVLNMEISGSGNNDSLGIESYGISVTTLEEVFLRVAGCDYDGVEHFEENDHSLVPDSVALLGSYDHPSTKKCFLGNYKKLLGLISSIVAGACGLIFAMVISFINFVGMLCCSCCLISGSTFWQHSRALFIKRAISARRDHKTIIFQLMIPAVFLLIGLLFLKLKPHPDQQGLTLSTSYFNPLLTGGGGGGPIPFNLSLPIAEKVAQNVKGGWIQRYKPSSYKFPNSGKALTDAVEAAGPTLGPALLSMSEYLMSSFNESYQSRYGAIVMDDQNNDGSLGYTVLHNCSCQHSAPTFINVMNSAILRLATGDTNMTIQTRNHPLPMTQSQLIQRHDLDAFSAAIIVNIAFSFIPASFAVSIVKEREVKAKHQQLISGVSVLSYWASTYIWDFVSFLFPASFAIILFYIFGLDQFVGGVSLLPTTVMLLEYGLAIASSTYCLTFFFFDHTVAQNVVLLIHFFTGLILMVISFIMGLIPNTITANTFLKNFFRISPGFCFADGLASLALLRQGMKDKTSDGIFDWNVTGASICYLAVESIGYFLLTLALEVCPSLKLTPFMIKKWWQSLNIFHRNTSYLEPLLEPSLETVPMDVDEDVDVKTERNRVLSGSLDNSIIYLRNLRKVYPEEKYLGKKVAVDSLTFSVQEGECFGFLGTNGAGKTTTLSMLCGEESPSNGTAFIFGKDICSHPKAARRYIGYCPQFDALLEFLTVQEHLELYARIKGVPEYTIDNVVKEKMMEFGLLKHANKPSFTLSGGNKRKLSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWDVISRISTRRGKTAVILTTHSMNEAQALCTRIGIMVGGRLRCIGSPQHLKTRFGNHLELEVKPTEVNPADLQTLCQAIQERVFDVPSHPRSLLSDLEVCIGGPDSIRAENSSIAEISLTRGMIGLIGRWLGNEERVKTLISCTPVSDGASGEQLSEQLFRDGGIPLPVFSEWWLSKQKFSEIDSFILSSFRGARWQGCNGLNIRYQIPYEEGLSLADVFGLLEGNRNRLGIAEYSISQSTLETIFNHFAANS 1855
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151199g00003 1855 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1422 1659 IPR027417 -
Stsc151199g00003 1855 CDD ABC_subfamily_A 1427 1653 - -
Stsc151199g00003 1855 Pfam ABC transporter 1449 1591 IPR003439 GO:0005524
Stsc151199g00003 1855 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 548 759 IPR003439 GO:0005524
Stsc151199g00003 1855 Pfam ABC-2 family transporter protein 955 1357 IPR013525 GO:0016020|GO:0140359
Stsc151199g00003 1855 Pfam ABC-2 family transporter protein 131 481 IPR013525 GO:0016020|GO:0140359
Stsc151199g00003 1855 CDD ABC_subfamily_A 548 747 - -
Stsc151199g00003 1855 Gene3D - 535 762 IPR027417 -
Stsc151199g00003 1855 Gene3D - 1419 1667 IPR027417 -
Stsc151199g00003 1855 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1427 1665 IPR003439 GO:0005524
Stsc151199g00003 1855 ProSitePatterns ABC transporters family signature. 661 675 IPR017871 GO:0005524|GO:0016887
Stsc151199g00003 1855 Coils Coil 1853 1855 - -
Stsc151199g00003 1855 Pfam ABC transporter 589 689 IPR003439 GO:0005524
Stsc151199g00003 1855 FunFam ABC transporter A family member 1 1416 1670 - -
Stsc151199g00003 1855 SMART AAA_5 1457 1644 IPR003593 GO:0016887
Stsc151199g00003 1855 PANTHER ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA 1062 1361 IPR026082 GO:0016020|GO:0055085|GO:0140359
Stsc151199g00003 1855 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 548 745 IPR027417 -
Stsc151199g00003 1855 ProSitePatterns ABC transporters family signature. 1564 1578 IPR017871 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151199g00003 Stsc-Chr151199 5906 23552 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151199g00003 584 762 Calmodulin-binding Proteins AT2G36910 25.000 5.73e-08 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151199g00003 K05643 - gmx:100803263 3210.62