Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151198g00005 ATGGATTCAACTTGCGTTGATACTTCACTCAATCTAAATCTTTCTCCTTCTCCGCCGCCTCCCACCAACTCTACTGAGGGAGAGGTATTTATGGTTGAAGAGTTACATCGTTTGAGTTGTGAGAACAAGAGGCTTACTGAAACGTTGACCTACATGTGTGTTAGCTATGAAGCTATGCAAAAGCGTTTGACCAAATTGATGATGAACACATCATCATCAGATTGTGATCATCATCTTCAATCAAGGAAGAGAAAAGCTGAAAGCTTTGAAAATTGTTGTAATGAAGAGGATTCGTTGCTCATCAAAAGGCCTAATCATAATCATAACATTATTGTTAATAACAATAATAATAATAAGGTTTCAAAGGTTCTTGTCAAGACAGATGCATCGGATACTAGCTTGTATGTGATGGACGGATATCAATGGAGGAAGTATGGTCAAAAGGTGACTAGAGATAACCCTTCTCCAAGAGCATACTTTCGTTGCTCCTTCGCCCCAAGTTGCCCTGTGAAAAAGAAGGTGCAAAGAAGTGTTGAAGACCCAACAATACTGGTAGCAACATATGAAGGACAACACAACCATGGTCGAAGCCAAACTGAAATATCACTTGTCTCATCACAAAGCCAATTAAGTGATACAATAATCCCTTTAGTTTCCTCACCAACACCATCATGCATTACATCATCATCTCCAACTACTACTACTACTACTCTTGACTTGGTCAAACATTCAAGATCTAATGTGGTTGACTTTGACCACCAACATAATACTAAAAATAAGTCGTCTTCTCTTTCTCCATCTTCTTCTCCTTCTTCTACTGTCCATCAGTTTTTGGTTCAAGAAATGGCCACTTCCTTGACAAGTGATCCTAAATTCACGGCAGCACTTGCCACTGCCATTTCAGGAAGAATTCTAGAACAGGCTTCTCTAGAAAAATTGTGA 942 0.3917 MDSTCVDTSLNLNLSPSPPPPTNSTEGEVFMVEELHRLSCENKRLTETLTYMCVSYEAMQKRLTKLMMNTSSSDCDHHLQSRKRKAESFENCCNEEDSLLIKRPNHNHNIIVNNNNNNKVSKVLVKTDASDTSLYVMDGYQWRKYGQKVTRDNPSPRAYFRCSFAPSCPVKKKVQRSVEDPTILVATYEGQHNHGRSQTEISLVSSQSQLSDTIIPLVSSPTPSCITSSSPTTTTTTLDLVKHSRSNVVDFDHQHNTKNKSSSLSPSSSPSSTVHQFLVQEMATSLTSDPKFTAALATAISGRILEQASLEKL 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151198g00005 313 MobiDBLite consensus disorder prediction 1 26 - -
Stsc151198g00005 313 MobiDBLite consensus disorder prediction 252 272 - -
Stsc151198g00005 313 Gene3D WRKY domain 119 196 IPR036576 GO:0003700|GO:0006355|GO:0043565
Stsc151198g00005 313 MobiDBLite consensus disorder prediction 258 272 - -
Stsc151198g00005 313 Pfam WRKY DNA -binding domain 138 194 IPR003657 GO:0003700|GO:0006355|GO:0043565
Stsc151198g00005 313 SMART WRKY_cls 136 196 IPR003657 GO:0003700|GO:0006355|GO:0043565
Stsc151198g00005 313 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 30 304 IPR044810 GO:0003700
Stsc151198g00005 313 FunFam WRKY transcription factor 40 121 198 - -
Stsc151198g00005 313 ProSiteProfiles WRKY domain profile. 138 197 IPR003657 GO:0003700|GO:0006355|GO:0043565
Stsc151198g00005 313 SUPERFAMILY WRKY DNA-binding domain 134 196 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151198g00005 Stsc-Chr151198 60862 63112 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151198g00005 3 312 WRKY Transcription Factor Family AT1G80840 40.240 1.50e-67 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Stsc151198g00005 WRKY 2e-23 CL0274