Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151197g00013 ATGCACAACAACAACAATAACCATAGCCGTTGTTCTGATTCCGGAGAGCCATGTGAGGATGGTAAATGGGCTTCCAAGCTCCTCAAGGAGTGTGCCATAGCAATCTCACAAAGAGACTCCACCAAAATCCACCACCTTCTATGGATGCTCAACGAACTCGCTTCCCCTTACGGTGACTTGGATCAGAAACTCGCCTCTTACTTCCTCCAAGCCTTGTTCTGCAAGGCCACGGAATCAGGCAACCGTTGCTACAAGACTCTCTCAACCGTCGCTCAAAAGAGCAACACCTTCGACTCCGCAAGAAAACTAATACTCAAATTCCAAGAGGTCTCCCCTTGGACAACCTTCGGCCACGTGGCAGCCAACGGCGCAATTCTTGAAGCCTTGGAAGGCGAGCCCAACCTCCACATAATTGACCTCAGCAACACGCTTTGCACCCAGTGGCCAACGCTGTTCGAAGCACTGGCCACCAGGAACGACGAAACCCCTCGTCTCAGGCTTACCGTGGTCGCGAGCGCGGCCACGGTAGGCTCTGTGATGAAGGAGGTTGGACAAAGAATGGAGAAGTTCGCGAGGCTCATGGGAGTTCCCTTCGAATTCAACGTAATCAACGGTCTCGATCGCCTCGGAGATCTCACGAAGGAATCGCTAGGGGTTACGAACGACGAAGCAATCGCCGTGAATTGCATCGGAGCGTTGCGGAGAATCGAGGTTGAAGAAAGGGAATCAGTTATTCGCATGTTCAGATCGCTGAGTCCGAAAGTCGTAACCGTCGTTGAGGAAGAAGCCGATTTCAGCAGCAATCGAAACGACTTCGTTCAGTGCTTTGAAGAGTGCCTTAAATTCTACAGCGTGTACTTCGAGATGCTGGAAGAGAGTTTTCCATTGACGAGCAACGAAAGGTTGATGCTGGAGAGGGATTGTTCGAGAAGCATAGTTAGGGTTTTAGCCTATAACGGTGATGATGATGAAGAGCTTCAAGATTGTTGTGAGAGACGAGAGAGAGGGATACAGTGGTGTGAGAAGCTGAAGAAGGAGTTTTCAGCTGCAACGTTCAGCGATGATGTTGTTGATGATGTTAAAGCATTGCTCAAGAGATACCGTGGAGGTTGGTCACTGGTTTTGCCACAACAACAACAACAAGGACATAATAGTAATTACACTAATAATAATAACAACAATAACAATCTCTCAGGGATTTACTTGACATGGAAGGATGAACCTGTAGTTTGGGCATCGGCATGGAAACCCTAG 1254 0.488 MHNNNNNHSRCSDSGEPCEDGKWASKLLKECAIAISQRDSTKIHHLLWMLNELASPYGDLDQKLASYFLQALFCKATESGNRCYKTLSTVAQKSNTFDSARKLILKFQEVSPWTTFGHVAANGAILEALEGEPNLHIIDLSNTLCTQWPTLFEALATRNDETPRLRLTVVASAATVGSVMKEVGQRMEKFARLMGVPFEFNVINGLDRLGDLTKESLGVTNDEAIAVNCIGALRRIEVEERESVIRMFRSLSPKVVTVVEEEADFSSNRNDFVQCFEECLKFYSVYFEMLEESFPLTSNERLMLERDCSRSIVRVLAYNGDDDEELQDCCERRERGIQWCEKLKKEFSAATFSDDVVDDVKALLKRYRGGWSLVLPQQQQQGHNSNYTNNNNNNNNLSGIYLTWKDEPVVWASAWKP 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151197g00013 417 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 25 406 IPR005202 -
Stsc151197g00013 417 ProSiteProfiles GRAS family profile. 15 416 IPR005202 -
Stsc151197g00013 417 Pfam GRAS domain family 26 416 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151197g00013 Stsc-Chr151197 51263 52516 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151197g00013 20 417 GRAS Transcription Factor Family AT4G37650 50.481 4.66e-138 404
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Stsc151197g00013 GRAS 5.4e-93 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151197g00013 - - ahf:112773020 728.398